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Transcript: SPBC17D11.08.1

Description

WD repeat protein, DDB1 and CUL4-associated factor 7 (predicted) [Source:PomBase;Acc:SPBC17D11.08]

Location

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features and is associated with 31 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	SPBC17D11.08.1	1756	435aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O74763	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Domains & features

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PROSITE profiles	311	346	-	PS50294	-
PANTHER	39	433	WD repeat-containing protein DCAF7-like	PTHR19919	IPR045159 [Display all genes with this domain]
SMART	81	140	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
SMART	150	195	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
SMART	198	238	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
Pfam	202	238	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
PROSITE profiles	205	247	WD40 repeat	PS50082	IPR001680 [Display all genes with this domain]
SMART	304	344	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
Pfam	308	344	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
PROSITE profiles	311	346	WD40 repeat	PS50082	IPR001680 [Display all genes with this domain]
PROSITE patterns	331	345	WD40 repeat, conserved site	PS00678	IPR019775 [Display all genes with this domain]
Superfamily	82	348	WD40-repeat-containing domain superfamily	SSF50978	IPR036322 [Display all genes with this domain]
Gene3D	44	430	WD40/YVTN repeat-like-containing domain superfamily	2.130.10.10	IPR015943 [Display all genes with this domain]

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Feature type	Start	End
Seg	358	371
Alphafold	1	435