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Transcript: SPAC15F9.02.1 seh1

Description

Seh1-associated complex subunit Seh1 [Source:PomBase;Acc:SPAC15F9.02]

Location

About this transcript

This transcript has 3 exons, is annotated with 14 domains and features and is associated with 23 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
seh1	SPAC15F9.02.1	1639	339aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q10099	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Domains & features

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	6	330	Sec13/Seh1 family	PTHR11024	IPR037363 [Display all genes with this domain]
SMART	3	42	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
PROSITE profiles	10	51	WD40 repeat	PS50082	IPR001680 [Display all genes with this domain]
Pfam	11	42	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
SMART	49	90	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
SMART	100	141	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
SMART	204	247	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
Pfam	205	246	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
SMART	278	317	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
Pfam	281	316	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
PROSITE profiles	285	317	WD40 repeat	PS50082	IPR001680 [Display all genes with this domain]
Superfamily	9	329	WD40-repeat-containing domain superfamily	SSF50978	IPR036322 [Display all genes with this domain]
Gene3D	5	334	WD40/YVTN repeat-like-containing domain superfamily	2.130.10.10	IPR015943 [Display all genes with this domain]

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Feature type	Start	End
Alphafold	1	339