Saccharomyces cerevisiae (R64-1-1)
Description

Protein containing a C-terminal SH3 domain; binds Las17p, which is a homolog of human Wiskott-Aldrich Syndrome protein involved in actin patch assembly and actin polymerization; protein abundance increases in response to DNA replication stress; LSB3 has a paralog, YSC84, that arose from the whole genome duplication [Source:SGD;Acc:S000002968]

Location
About this transcript

This transcript has 2 exons, is annotated with 31 domains and features, is associated with 34 variant alleles and maps to 29 oligo probes.

Gene

This transcript is a product of gene YFR024C-A Show transcript tableHide transcript table

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
LSB3YFR024C-A_mRNA1380459aa
 
Protein coding
P43603 -Ensembl Canonical

Protein domains for YFR024C-A.

PIRSF

Protein domains and motifs from the PIR (Protein Information Resource) Superfamily database.

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Coiled-coils (Ncoils)

Coiled-coil regions predicted by Ncoils.

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Cleavage site (Signalp)

Signal peptide cleavage sites predicted by SignalP.

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TIGRFAM

Protein domains and motifs from the TIGRFAM database.

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PROSITE patterns

Protein domains and motifs from the PROSITE patterns database.

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HAMAP

HAMAP families.

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Transmembrane helices

Transmembrane helices predicted by TMHMM.

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NCBIFAM

NCBIfam is a collection of protein families based on Hidden Markov Models (HMMs).

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SFLD

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MobiDB lite

Intrinsically disordered regions predicted by MobiDB lite.

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Low complexity (Seg)

Low complexity peptide sequences identified by Seg.

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AFDB-ENSP mappings

Protein features that represent the mapping between Ensembl proteins (ENSP) and AlphaFoldDB protein structures (including their corresponding chains). Imported via UniProt mappings

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Superfamily

Protein domains and motifs from the SUPERFAMILY database.

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SMART

Protein domains and motifs from the SMART database.

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Prints

Protein fingerprints (groups of conserved motifs) from the PRINTS database.

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Pfam

Protein domains and motifs from the Pfam database.

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PROSITE profiles

Protein domains and motifs from the PROSITE profiles database.

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PANTHER

PANTHER families.

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Gene3D

CATH/Gene3D families.

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CDD

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Sequence variants (all sources)

Sequence variants from all sources

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Statistics

Ave. residue weight: 107.504 g/mol

Charge: 1.5

Isoelectric point: 7.8912

Molecular weight: 49,344.11 g/mol

Number of residues: 459 aa