Rhizophagus irregularis str. C2 (ASM159315v1)

Rhizophagus irregularis str. C2 Assembly and Gene Annotation

About Rhizophagus irregularis str. C2

Rhizophagus irregularis (previously known as Glomus intraradices) is an arbuscular mycorrhizal fungus used as a soil inoculant in agriculture and horticulture. In addition, it is one of the best mycorrhizal varieties of fungi available to mycoforestry, but as it does not produce fruiting bodies it
"has virtually no market value as an edible or medicinal mushroom
"

Rhizophagus irregularis is also commonly used in scientific studies of the effects of arbuscular mycorrhizal fungi on plant and soil improvement.

Recent molecular analysis of Ribosomal DNA suggested that Glomus intraradices is not in fact in the genus Glomus at all, and should be renamed Rhizophagus intraradices.

(Text and image from Wikipedia, the free encyclopaedia.)

Assembly

The assembly presented is the ASM159315v1 assembly submitted to INSDC with the assembly accession GCA_001593155.1.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_001593155.1, with additional non-coding genes derived from Rfam. For more details, please visit INSDC annotation import.

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

AssemblyASM159315v1, INSDC Assembly GCA_001593155.1,
Database version113.1
Golden Path Length122,873,294
Genebuild byUniversity of Ottawa
Genebuild methodImport
Data sourceUniversity of Ottawa

Gene counts

Coding genes26,618
Non coding genes88
Small non coding genes88
Pseudogenes5
Gene transcripts26,711