Rhizophagus irregularis DAOM 181602=DAOM 197198 (ASM43914v3)

Rhizophagus irregularis DAOM 181602=DAOM 197198 Assembly and Gene Annotation

About Rhizophagus irregularis DAOM 181602=DAOM 197198 (GCA_000439145)

Rhizophagus irregularis (previously known as Glomus intraradices) is an arbuscular mycorrhizal fungus used as a soil inoculant in agriculture and horticulture. In addition, it is one of the best mycorrhizal varieties of fungi available to mycoforestry, but as it does not produce fruiting bodies it
"has virtually no market value as an edible or medicinal mushroom
"

Rhizophagus irregularis is also commonly used in scientific studies of the effects of arbuscular mycorrhizal fungi on plant and soil improvement.

Recent molecular analysis of Ribosomal DNA suggested that Glomus intraradices is not in fact in the genus Glomus at all, and should be renamed Rhizophagus intraradices.

(Text and image from Wikipedia, the free encyclopaedia.)

Assembly

The assembly presented is the ASM43914v3 assembly submitted to INSDC with the assembly accession GCA_000439145.3.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_000439145.3, with additional non-coding genes derived from Rfam. For more details, please visit INSDC annotation import.

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

AssemblyASM43914v3, INSDC Assembly GCA_000439145.3,
Database version113.1
Golden Path Length136,726,313
Genebuild byDOE Joint Genome Institute
Genebuild methodImport
Data sourceDOE Joint Genome Institute

Gene counts

Coding genes26,143
Non coding genes99
Small non coding genes99
Pseudogenes3
Gene transcripts26,249