Rhizophagus irregularis DAOM 181602=DAOM 197198 Assembly and Gene Annotation
About Rhizophagus irregularis DAOM 181602=DAOM 197198 (GCA_000439145)
Rhizophagus irregularis (previously known as Glomus
intraradices) is an arbuscular mycorrhizal fungus used as a soil
inoculant in agriculture and horticulture. In addition, it is one of the
best mycorrhizal varieties of fungi available to mycoforestry, but as it
does not produce fruiting bodies it
"has virtually no market value as
an edible or medicinal mushroom
"
Rhizophagus irregularis is also commonly used in scientific studies of the effects of arbuscular mycorrhizal fungi on plant and soil improvement.
Recent molecular analysis of Ribosomal DNA suggested that Glomus intraradices is not in fact in the genus Glomus at all, and should be renamed Rhizophagus intraradices.
(Text and image from Wikipedia, the free encyclopaedia.)
Assembly
The assembly presented is the ASM43914v3 assembly submitted to INSDC with the assembly accession GCA_000439145.3.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_000439145.3, with additional non-coding genes derived from Rfam. For more details, please visit INSDC annotation import.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
Assembly | ASM43914v3, INSDC Assembly GCA_000439145.3, |
Database version | 113.1 |
Golden Path Length | 136,726,313 |
Genebuild by | DOE Joint Genome Institute |
Genebuild method | Import |
Data source | DOE Joint Genome Institute |
Gene counts
Coding genes | 26,143 |
Non coding genes | 99 |
Small non coding genes | 99 |
Pseudogenes | 3 |
Gene transcripts | 26,249 |