Rhizoctonia solani AG-1 IA str. AG1 IA Assembly and Gene Annotation
About Rhizoctonia solani AG-1 IA str. AG1 IA (GCA_000334115)
Rhizoctonia solani (teleomorph: Thanatephorus cucumeris) is a plant pathogenic fungus with a wide host range and worldwide distribution. It was discovered more than 100 years ago. R. solani frequently exists as thread-like growth on plants or in culture, and is considered a soil-borne pathogen. R. solani is best known to cause various plant diseases such as collar rot, root rot, damping off, and wire stem. R. solani attacks its hosts when they are in their early stages of development, such as seeds and seedlings, which are typically found in the soil. The pathogen is known to cause serious plant losses by attacking primarily the roots and lower stems of plants. Although it has a wide range of hosts, its main targets are herbaceous plants. R. solani would be considered a basidiomycete fungus if the teleomorph stage were more abundant. The pathogen is not currently known to produce any asexual spores (conidia), though it is considered to have an asexual lifecycle. Occasionally, sexual spores (basidiospores) are produced on infected plants. The disease cycle of R. solani is important in management and control of the pathogen.
(Text and image from Wikipedia, the free encyclopaedia.)
Assembly
The assembly presented is the Rhisol_AG1IA_1.0 assembly submitted to INSDC with the assembly accession GCA_000334115.1.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_000334115.1, with additional non-coding genes derived from Rfam. For more details, please visit INSDC annotation import.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
Assembly | Rhisol_AG1IA_1.0, INSDC Assembly GCA_000334115.1, |
Database version | 113.1 |
Golden Path Length | 36,938,120 |
Genebuild by | Rice Research Institute of Sichuan Agricultural University |
Genebuild method | Import |
Data source | Rice Research Institute of Sichuan Agricultural University |
Gene counts
Coding genes | 10,489 |
Non coding genes | 245 |
Small non coding genes | 242 |
Long non coding genes | 3 |
Pseudogenes | 7 |
Gene transcripts | 10,741 |