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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: EFQ88360 PTT_15782-1

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Description

hypothetical protein

Location

SuperContig GL536423: 1,813-3,345 forward strand.

About this transcript

This transcript has 2 exons and is annotated with 21 domains and features.

Gene

This transcript is a product of gene PTT_15782 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
PTT_15782-1	EFQ88360	1500	499aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E3S0Y3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Pfam	16	54	-	PF14555	-
CDD	23	52	-	cd14273	-
Gene3D	150	309	-	3.40.30.10	-
Gene3D	389	487	-	3.10.20.90	-
CDD	397	485	-	cd01767	-
Superfamily	157	305	Thioredoxin-like superfamily	SSF52833	IPR036249 [Display all genes with this domain]
SMART	165	297	UAS	SM00594	IPR006577 [Display all genes with this domain]
Superfamily	12	54	UBA-like superfamily	SSF46934	IPR009060 [Display all genes with this domain]
SMART	388	486	UBX domain	SM00166	IPR001012 [Display all genes with this domain]
PROSITE profiles	391	461	UBX domain	PS50033	IPR001012 [Display all genes with this domain]
Pfam	391	485	UBX domain	PF00789	IPR001012 [Display all genes with this domain]
PANTHER	28	474	UBX domain-containing protein	PTHR23322	IPR050730 [Display all genes with this domain]
Superfamily	381	486	Ubiquitin-like domain superfamily	SSF54236	IPR029071 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	303	333
MobiDBLite	303	359
MobiDBLite	334	359
Seg	98	112
Seg	336	363
Seg	485	499
Alphafold	1	499
Ncoils	332	372

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