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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: EFQ90195 PTT_13285-1

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Description

hypothetical protein

Location

SuperContig GL535315: 20,985-23,211 reverse strand.

About this transcript

This transcript has 7 exons and is annotated with 22 domains and features.

Gene

This transcript is a product of gene PTT_13285 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
PTT_13285-1	EFQ90195	1695	564aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E3RVQ6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
CDD	206	263	-	cd16625	-
Superfamily	206	286	-	SSF57850	-
Gene3D	321	556	-	1.20.120.1750	-
CDD	344	399	-	cd20356	-
Superfamily	344	400	-	SSF57850	-
Pfam	347	386	-	PF22191	-
Pfam	410	528	Ariadne domain	PF19422	IPR045840 [Display all genes with this domain]
PANTHER	123	434	E3 ubiquitin ligase RBR family	PTHR11685	IPR031127 [Display all genes with this domain]
Pfam	139	178	E3 ubiquitin-protein ligase ARIH1-like, UBA-like domain	PF21235	IPR048962 [Display all genes with this domain]
Pfam	277	315	IBR domain	PF01485	IPR002867 [Display all genes with this domain]
SMART	277	395	IBR domain	SM00647	IPR002867 [Display all genes with this domain]
PROSITE profiles	204	399	TRIAD supradomain	PS51873	IPR044066 [Display all genes with this domain]
Pfam	208	239	Zinc finger, C3HC4 RING-type	PF00097	IPR018957 [Display all genes with this domain]
PROSITE profiles	208	254	Zinc finger, RING-type	PS50089	IPR001841 [Display all genes with this domain]
SMART	208	256	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
SMART	352	381	Zinc finger, RING-type	SM00184	IPR001841 [Display all genes with this domain]
PROSITE patterns	225	234	Zinc finger, RING-type, conserved site	PS00518	IPR017907 [Display all genes with this domain]
Gene3D	204	290	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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End

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Feature type	Start	End
MobiDBLite	28	91
Seg	39	60
Seg	98	107
Alphafold	1	564

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