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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AWU78539

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Description

cytochrome oxidase subunit 1

Location

Chromosome MT: 7,655-9,283 forward strand.

About this transcript

This transcript has 1 exon and is annotated with 34 domains and features.

Gene

This transcript is a product of gene C5L36_MT00130 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	Flags
-	AWU78539	1629	542aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	11	538	Cytochrome c oxidase subunit I	PTHR10422	IPR000883 [Display all genes with this domain]
Prints	13	38	Cytochrome c oxidase subunit I	PR01165	IPR000883 [Display all genes with this domain]
Pfam	23	469	Cytochrome c oxidase subunit I	PF00115	IPR000883 [Display all genes with this domain]
Prints	62	85	Cytochrome c oxidase subunit I	PR01165	IPR000883 [Display all genes with this domain]
Prints	90	114	Cytochrome c oxidase subunit I	PR01165	IPR000883 [Display all genes with this domain]
Prints	132	144	Cytochrome c oxidase subunit I	PR01165	IPR000883 [Display all genes with this domain]
Prints	164	182	Cytochrome c oxidase subunit I	PR01165	IPR000883 [Display all genes with this domain]
Prints	193	212	Cytochrome c oxidase subunit I	PR01165	IPR000883 [Display all genes with this domain]
Prints	244	265	Cytochrome c oxidase subunit I	PR01165	IPR000883 [Display all genes with this domain]
Prints	290	305	Cytochrome c oxidase subunit I	PR01165	IPR000883 [Display all genes with this domain]
Prints	314	335	Cytochrome c oxidase subunit I	PR01165	IPR000883 [Display all genes with this domain]
Prints	349	367	Cytochrome c oxidase subunit I	PR01165	IPR000883 [Display all genes with this domain]
Prints	377	396	Cytochrome c oxidase subunit I	PR01165	IPR000883 [Display all genes with this domain]
Prints	427	448	Cytochrome c oxidase subunit I	PR01165	IPR000883 [Display all genes with this domain]
CDD	18	499	Cytochrome c oxidase subunit I domain	cd01663	IPR033944 [Display all genes with this domain]
PROSITE patterns	246	300	Cytochrome c oxidase, subunit I, copper-binding site	PS00077	IPR023615 [Display all genes with this domain]
Superfamily	10	538	Cytochrome c oxidase-like, subunit I superfamily	SSF81442	IPR036927 [Display all genes with this domain]
Gene3D	10	542	Cytochrome c oxidase-like, subunit I superfamily	1.20.210.10	IPR036927 [Display all genes with this domain]
PROSITE profiles	14	542	Cytochrome c oxidase-like, subunit I domain	PS50855	IPR023616 [Display all genes with this domain]

Other features

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Feature type
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End

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Feature type	Start	End
Seg	172	181
Seg	505	516
TMHMM	25	47
TMHMM	67	89
TMHMM	110	132
TMHMM	152	174
TMHMM	194	216
TMHMM	246	268
TMHMM	275	297
TMHMM	312	334
TMHMM	346	368
TMHMM	383	405
TMHMM	418	440
TMHMM	455	477
Alphafold	1	542

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