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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: MVLG_02715T0

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Description

hypothetical protein [Source:BROAD_M_violaceum;Acc:MVLG_02715]

Location

SuperContig supercont1.22: 102,689-108,587 reverse strand.

About this transcript

This transcript has 22 exons and is annotated with 32 domains and features.

Gene

This transcript is a product of gene MVLG_02715 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	MVLG_02715T0	4167	1388aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U5H608	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	980	1072	-	3.30.2230.10	-
Gene3D	1177	1242	-	3.10.20.90	-
Gene3D	1358	1386	-	2.30.30.380	-
Superfamily	986	1066	DUSP-like superfamily	SSF143791	IPR035927 [Display all genes with this domain]
Superfamily	215	602	Papain-like cysteine peptidase superfamily	SSF54001	IPR038765 [Display all genes with this domain]
Pfam	218	523	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PF00443	IPR001394 [Display all genes with this domain]
PROSITE profiles	955	1070	Peptidase C19, ubiquitin-specific peptidase, DUSP domain	PS51283	IPR006615 [Display all genes with this domain]
PANTHER	164	630	Ubiquitin carboxyl-terminal hydrolases	PTHR24006	IPR050164 [Display all genes with this domain]
PROSITE profiles	218	520	Ubiquitin specific protease domain	PS50235	IPR028889 [Display all genes with this domain]
PROSITE patterns	219	234	Ubiquitin specific protease, conserved site	PS00972	IPR018200 [Display all genes with this domain]
PROSITE patterns	465	483	Ubiquitin specific protease, conserved site	PS00973	IPR018200 [Display all genes with this domain]
PROSITE profiles	1167	1248	Ubiquitin-like domain	PS50053	IPR000626 [Display all genes with this domain]
Pfam	1184	1241	Ubiquitin-like domain	PF00240	IPR000626 [Display all genes with this domain]
Superfamily	1183	1244	Ubiquitin-like domain superfamily	SSF54236	IPR029071 [Display all genes with this domain]
CDD	1186	1280	Ubiquitin-specific-processing protease 48, Ubl domain	cd01795	IPR044743 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	1	53
MobiDBLite	39	53
MobiDBLite	74	163
MobiDBLite	87	124
MobiDBLite	517	538
MobiDBLite	517	594
MobiDBLite	554	570
MobiDBLite	574	594
MobiDBLite	685	715
Seg	131	141
Seg	517	540
Seg	555	577
Seg	710	722
Seg	971	984
Seg	1316	1335
Seg	1342	1362
Ncoils	650	670

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