▼

Favourite species

All species

Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

.

Transcript: MVLG_02614T0

.

Description

hypothetical protein [Source:BROAD_M_violaceum;Acc:MVLG_02614]

Location

SuperContig supercont1.21: 28,174-30,080 forward strand.

About this transcript

This transcript has 6 exons and is annotated with 16 domains and features.

Gene

This transcript is a product of gene MVLG_02614 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	MVLG_02614T0	1332	373aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U5H5P7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

.

Domains & features

.

Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PROSITE profiles	340	373	-	PS50294	-
PANTHER	27	371	WD repeat-containing protein 89	PTHR22889	IPR039328 [Display all genes with this domain]
SMART	73	114	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
SMART	165	208	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
Pfam	168	207	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
PROSITE profiles	173	210	WD40 repeat	PS50082	IPR001680 [Display all genes with this domain]
SMART	331	372	WD40 repeat	SM00320	IPR001680 [Display all genes with this domain]
PROSITE profiles	340	373	WD40 repeat	PS50082	IPR001680 [Display all genes with this domain]
Pfam	341	372	WD40 repeat	PF00400	IPR001680 [Display all genes with this domain]
Superfamily	53	372	WD40-repeat-containing domain superfamily	SSF50978	IPR036322 [Display all genes with this domain]
Gene3D	24	232	WD40/YVTN repeat-like-containing domain superfamily	2.130.10.10	IPR015943 [Display all genes with this domain]
Gene3D	243	373	WD40/YVTN repeat-like-containing domain superfamily	2.130.10.10	IPR015943 [Display all genes with this domain]

Other features

Show/hide columns

Feature type
Start
End

Download what you see Download whole table

Filter

Feature type	Start	End
MobiDBLite	1	20
Seg	12	27
Seg	332	342
Alphafold	1	373

.

Personal Data