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    Melampsora larici-populina (GCA_000204055.1) ▼

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    Transcript: EGG03892 MELLADRAFT_89682-1

    Description

    FYVE, beach and WD40-domain-containing protein

    Location

    SuperContig GL883121: 7,536-18,452 forward strand.

    About this transcript

    This transcript has 26 exons and is annotated with 37 domains and features.

    Gene

    This transcript is a product of gene MELLADRAFT_89682 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
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    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    MELLADRAFT_89682-1EGG0389288172938aa
     
    Protein coding
    		F4RU81 -Ensembl Canonical

    Domains & features

    Domains

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    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
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    Domain sourceStartEndDescriptionAccessionInterPro
    Superfamily21262250-SSF50729-
    PROSITE profiles26992733-PS50294-
    CDD28852926-cd00065-
    PROSITE profiles22652562BEACH domainPS50197IPR000409 [Display all genes with this domain]
    CDD22772562BEACH domaincd06071IPR000409 [Display all genes with this domain]
    SMART22772562BEACH domainSM01026IPR000409 [Display all genes with this domain]
    Pfam22792562BEACH domainPF02138IPR000409 [Display all genes with this domain]
    Superfamily22652562BEACH domain superfamilySSF81837IPR036372 [Display all genes with this domain]
    Gene3D22682562BEACH domain superfamily1.10.1540.10IPR036372 [Display all genes with this domain]
    PANTHER17792871BEACH domain-containing proteinPTHR46108IPR051944 [Display all genes with this domain]
    SMART28712932FYVE zinc fingerSM00064IPR000306 [Display all genes with this domain]
    PROSITE profiles21212254PH-BEACH domainPS51783IPR023362 [Display all genes with this domain]
    CDD21242253PH-BEACH domaincd01201IPR023362 [Display all genes with this domain]
    Pfam21962253PH-BEACH domainPF14844IPR023362 [Display all genes with this domain]
    Gene3D21252253PH-like domain superfamily2.30.29.30IPR011993 [Display all genes with this domain]
    SMART26432682WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART26922731WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam26952731WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles26992740WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART27342771WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    SMART27732817WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    PROSITE patterns27182732WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
    Superfamily26162885WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Gene3D26032690WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
    Gene3D26912916WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
    Superfamily28762935Zinc finger, FYVE/PHD-typeSSF57903IPR011011 [Display all genes with this domain]

    Other features

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    • Feature type
    • Start
    • End
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    Feature typeStartEnd
    MobiDBLite1630
    MobiDBLite1644
    MobiDBLite10271051
    MobiDBLite20202043
    Seg196207
    Seg10711078
    Seg12861297
    Seg14601471
    Seg16601672
    Seg29032912
    Ncoils7494

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