Melampsora larici-populina (GCA_000204055.1) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID History.
hypothetical protein
SuperContig GL883116: 644,265-647,916 reverse strand.
This transcript has 13 exons and is annotated with 30 domains and features.
This transcript is a product of gene MELLADRAFT_37211 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| Superfamily | 10 | 90 | - | SSF57850 | - |
| Superfamily | 167 | 275 | - | SSF57850 | - |
| CDD | 319 | 821 | - | cd02658 | - |
| Gene3D | 634 | 670 | - | 1.10.8.10 | - |
| CDD | 638 | 675 | - | cd14301 | - |
| Gene3D | 671 | 737 | - | 1.10.8.10 | - |
| CDD | 695 | 733 | - | cd14297 | - |
| Superfamily | 314 | 823 | Papain-like cysteine peptidase superfamily | SSF54001 | IPR038765 [Display all genes with this domain] |
| Pfam | 318 | 822 | Peptidase C19, ubiquitin carboxyl-terminal hydrolase | PF00443 | IPR001394 [Display all genes with this domain] |
| Superfamily | 692 | 732 | UBA-like superfamily | SSF46934 | IPR009060 [Display all genes with this domain] |
| PANTHER | 92 | 821 | Ubiquitin carboxyl-terminal hydrolase | PTHR21646 | IPR050185 [Display all genes with this domain] |
| PROSITE profiles | 318 | 831 | Ubiquitin specific protease domain | PS50235 | IPR028889 [Display all genes with this domain] |
| PROSITE patterns | 319 | 334 | Ubiquitin specific protease, conserved site | PS00972 | IPR018200 [Display all genes with this domain] |
| PROSITE patterns | 766 | 784 | Ubiquitin specific protease, conserved site | PS00973 | IPR018200 [Display all genes with this domain] |
| PROSITE profiles | 634 | 675 | Ubiquitin-associated domain | PS50030 | IPR015940 [Display all genes with this domain] |
| SMART | 636 | 674 | Ubiquitin-associated domain | SM00165 | IPR015940 [Display all genes with this domain] |
| Pfam | 636 | 679 | Ubiquitin-associated domain | PF22562 | IPR015940 [Display all genes with this domain] |
| PROSITE profiles | 691 | 732 | Ubiquitin-associated domain | PS50030 | IPR015940 [Display all genes with this domain] |
| SMART | 694 | 731 | Ubiquitin-associated domain | SM00165 | IPR015940 [Display all genes with this domain] |
| Pfam | 699 | 737 | Ubiquitin-associated domain | PF22562 | IPR015940 [Display all genes with this domain] |
| PIRSF | 11 | 829 | Ubiquitinyl hydrolase | PIRSF016308 | IPR016652 [Display all genes with this domain] |
| Pfam | 23 | 89 | Ubiquitinyl hydrolase, variant UBP zinc finger | PF17807 | IPR041432 [Display all genes with this domain] |
| Gene3D | 10 | 114 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| Gene3D | 155 | 263 | Zinc finger, RING/FYVE/PHD-type | 3.30.40.10 | IPR013083 [Display all genes with this domain] |
| SMART | 35 | 88 | Zinc finger, UBP-type | SM00290 | IPR001607 [Display all genes with this domain] |
| PROSITE profiles | 166 | 276 | Zinc finger, UBP-type | PS50271 | IPR001607 [Display all genes with this domain] |
| SMART | 190 | 245 | Zinc finger, UBP-type | SM00290 | IPR001607 [Display all genes with this domain] |
| Pfam | 191 | 264 | Zinc finger, UBP-type | PF02148 | IPR001607 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| Seg | 515 | 528 |
| Alphafold | 1 | 831 |
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Ensembl Fungi release 60 - October 2024 © EMBL-EBI EMBL-EBI
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