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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: CAY71441 PAS_chr4_0215-1

Description

SH3 domain protein implicated in the regulation of actin polymerization

Location

Chromosome 4: 430,621-432,444 reverse strand.

About this transcript

This transcript has 1 exon and is annotated with 30 domains and features.

Gene

This transcript is a product of gene PAS_chr4_0215 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
PAS_chr4_0215-1	CAY71441	1824	607aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4R766	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Domains & features

Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	469	535	-	2.30.30.40	-
Prints	519	538	-	PR00499	-
Gene3D	536	607	-	2.30.30.40	-
Prints	555	575	-	PR00499	-
PANTHER	556	605	-	PTHR15735	-
Prints	575	591	-	PR00499	-
Prints	591	604	-	PR00499	-
Gene3D	3	278	AH/BAR domain superfamily	1.20.1270.60	IPR027267 [Display all genes with this domain]
Superfamily	13	292	AH/BAR domain superfamily	SSF103657	IPR027267 [Display all genes with this domain]
CDD	476	531	Bzz1, SH3 domain 1	cd11912	IPR035459 [Display all genes with this domain]
PROSITE profiles	3	269	F-BAR domain	PS51741	IPR031160 [Display all genes with this domain]
SMART	3	108	FCH domain	SM00055	IPR001060 [Display all genes with this domain]
Pfam	13	102	FCH domain	PF00611	IPR001060 [Display all genes with this domain]
PROSITE profiles	472	534	SH3 domain	PS50002	IPR001452 [Display all genes with this domain]
Prints	475	485	SH3 domain	PR00452	IPR001452 [Display all genes with this domain]
SMART	475	533	SH3 domain	SM00326	IPR001452 [Display all genes with this domain]
Pfam	478	526	SH3 domain	PF00018	IPR001452 [Display all genes with this domain]
PROSITE profiles	550	607	SH3 domain	PS50002	IPR001452 [Display all genes with this domain]
SMART	553	607	SH3 domain	SM00326	IPR001452 [Display all genes with this domain]
Pfam	557	601	SH3 domain	PF00018	IPR001452 [Display all genes with this domain]
Prints	567	582	SH3 domain	PR00452	IPR001452 [Display all genes with this domain]
Prints	595	607	SH3 domain	PR00452	IPR001452 [Display all genes with this domain]
Superfamily	476	545	SH3-like domain superfamily	SSF50044	IPR036028 [Display all genes with this domain]
Superfamily	540	606	SH3-like domain superfamily	SSF50044	IPR036028 [Display all genes with this domain]
PROSITE profiles	467	533	SH3-like domain, bacterial-type	PS51781	IPR003646 [Display all genes with this domain]

Other features

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Feature type	Start	End
Seg	108	117
Seg	336	349
Alphafold	1	607
Alphafold	1	607
Ncoils	174	194

Personal Data

Transcript: CAY71441 PAS_chr4_0215-1

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Transcript: CAY71441 PAS_chr4_0215-1

Domains & features

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