Fusarium solani (v2.0)

Fusarium solani Assembly and Gene Annotation

About Fusarium solani mpVI 77-13-4

Fusarium solani is a species complex of at least 26 closely related filamentous fungi in the division Ascomycota, family Nectriaceae. It is the anamorph of Nectria haematococca. It is a common soil inhabiting mold. Fusarium solani is implicated in plant diseases as well as in serious human diseases such as fungal keratitis.

Picture credit: Creative Commons Attribution 3.0 us via Wikimedia Commons (Image source) Taxonomy ID 660122

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Annotation

Annotation of Fusarium solani is provided by JGI. Non coding RNA genes have been annotated using tRNAScan-SE (Lowe, T.M. and Eddy, S.R. 1997), RFAM (Griffiths-Jones et al 2005), and RNAmmer (Lagesen K.,et al 2007); additional analysis tools have also been applied.

References

  1. The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion.
    Coleman JJ, Rounsley SD, Rodriguez-Carres M, Kuo A, Wasmann CC, Grimwood J, Schmutz J, Taga M, White GJ, Zhou S et al. 2009. PLoS Genet.. 5:e1000618.

Picture credit: The School of Plant Sciences, The University of Arizona

Other data

EST sequences were mapped to the genome using Exonerate.

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

Assemblyv2.0, INSDC Assembly GCA_000151355.1, Mar 2007
Database version115.1
Golden Path Length51,291,997
Genebuild byJGI
Genebuild methodImport
Data sourceJGI

Gene counts

Coding genes15,705
Non coding genes454
Small non coding genes452
Long non coding genes2
Pseudogenes4
Gene transcripts16,163