
Fusarium solani Assembly and Gene Annotation
About Fusarium solani mpVI 77-13-4
Fusarium solani is a species complex of at least 26 closely related filamentous fungi in the division Ascomycota, family Nectriaceae. It is the anamorph of Nectria haematococca. It is a common soil inhabiting mold. Fusarium solani is implicated in plant diseases as well as in serious human diseases such as fungal keratitis.
Picture credit: Creative Commons Attribution 3.0 us via Wikimedia Commons (Image source) Taxonomy ID 660122
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Annotation
Annotation of Fusarium solani is provided by JGI. Non coding RNA genes have been annotated using tRNAScan-SE (Lowe, T.M. and Eddy, S.R. 1997), RFAM (Griffiths-Jones et al 2005), and RNAmmer (Lagesen K.,et al 2007); additional analysis tools have also been applied.
References
- The genome of Nectria haematococca: contribution of supernumerary
chromosomes to gene
expansion.
Coleman JJ, Rounsley SD, Rodriguez-Carres M, Kuo A, Wasmann CC, Grimwood J, Schmutz J, Taga M, White GJ, Zhou S et al. 2009. PLoS Genet.. 5:e1000618.
Picture credit: The School of Plant Sciences, The University of Arizona
Other data
EST sequences were mapped to the genome using Exonerate.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
Assembly | v2.0, INSDC Assembly GCA_000151355.1, Mar 2007 |
Database version | 115.1 |
Golden Path Length | 51,291,997 |
Genebuild by | JGI |
Genebuild method | Import |
Data source | JGI |
Gene counts
Coding genes | 15,705 |
Non coding genes | 454 |
Small non coding genes | 452 |
Long non coding genes | 2 |
Pseudogenes | 4 |
Gene transcripts | 16,163 |