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    Transcript: FOXG_02253T0

    Description

    polyadenylation factor subunit 2 [Source:BROAD_F_oxysporum;Acc:FOXG_02253]

    Location

    Chromosome 5: 3,673,331-3,675,535 forward strand.

    About this transcript

    This transcript has 3 exons and is annotated with 39 domains and features.

    Gene

    This transcript is a product of gene FOXG_02253 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • RefSeq
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
    -FOXG_02253T01854617aa
     
    Protein coding
    		A0A0D2XEC1 -Ensembl Canonical

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
    Download what you seeDownload whole table
    Domain sourceStartEndDescriptionAccessionInterPro
    CDD92400-cd00200-
    PROSITE profiles130162-PS50294-
    PROSITE profiles171203-PS50294-
    PROSITE profiles213245-PS50294-
    PROSITE profiles368400-PS50294-
    PANTHER15464Pre-mRNA 3' end processing protein Pfs2-likePTHR22836IPR045245 [Display all genes with this domain]
    SMART81120WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    PROSITE profiles88120WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART123162WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam128161WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles130162WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART164203WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam167203WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles171212WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART206245WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam210245WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles213254WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART248288WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam250288WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    SMART291331WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam297328WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    SMART360400WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    PROSITE profiles368400WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    Pfam370400WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    Superfamily84399WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Gene3D71209WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
    Gene3D210448WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

    Other features

    Show/hide columns
    • Feature type
    • Start
    • End
    Download what you seeDownload whole table
    Feature typeStartEnd
    MobiDBLite421449
    MobiDBLite427441
    MobiDBLite525617
    MobiDBLite543584
    MobiDBLite586617
    Seg717
    Seg433449
    Seg462530
    Seg539584
    Seg585595
    Alphafold1617
    Ncoils434454

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