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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
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External References
- General identifiers
- Oligo probes
Supporting evidence
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Transcript: FOXG_00343T0

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Description

conserved hypothetical protein [Source:BROAD_F_oxysporum;Acc:FOXG_00343]

Location

Chromosome 1: 2,714,878-2,718,115 reverse strand.

About this transcript

This transcript has 1 exon and is annotated with 17 domains and features.

Gene

This transcript is a product of gene FOXG_00343 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	FOXG_00343T0	3238	868aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0D2X8Y3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	495	614	-	1.20.1310.10	-
Gene3D	624	768	-	3.30.230.130	-
PANTHER	70	867	Anaphase-promoting complex subunit 2	PTHR45957	IPR044554 [Display all genes with this domain]
Pfam	807	865	Anaphase-promoting complex subunit 2, C-terminal	PF08672	IPR014786 [Display all genes with this domain]
SMART	807	865	Anaphase-promoting complex subunit 2, C-terminal	SM01013	IPR014786 [Display all genes with this domain]
SMART	537	685	Cullin homology domain	SM00182	IPR016158 [Display all genes with this domain]
PROSITE profiles	541	743	Cullin homology domain	PS50069	IPR016158 [Display all genes with this domain]
Superfamily	511	760	Cullin homology domain superfamily	SSF75632	IPR036317 [Display all genes with this domain]
Pfam	541	748	Cullin, N-terminal	PF00888	IPR001373 [Display all genes with this domain]
Superfamily	797	866	Winged helix DNA-binding domain superfamily	SSF46785	IPR036390 [Display all genes with this domain]
Gene3D	797	865	Winged helix-like DNA-binding domain superfamily	1.10.10.10	IPR036388 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	766	797
MobiDBLite	783	797
Seg	55	63
Seg	819	831
Alphafold	1	868
Alphafold	1	868

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