Cryptococcus neoformans var. neoformans JEC21 (ASM9104v1) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
ATP-dependent RNA helicase A, putative
Chromosome 2: 1,510,539-1,515,957 forward strand.
This transcript has 16 exons and is annotated with 35 domains and features.
This transcript is a product of gene CNB05350 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| Gene3D | 57 | 144 | - | 3.30.160.20 | - |
| CDD | 67 | 138 | - | cd00048 | - |
| PANTHER | 603 | 1362 | - | PTHR18934 | - |
| CDD | 664 | 830 | - | cd17917 | - |
| CDD | 835 | 1039 | - | cd18791 | - |
| Gene3D | 1075 | 1181 | - | 1.20.120.1080 | - |
| Pfam | 1129 | 1186 | - | PF21010 | - |
| Pfam | 1264 | 1361 | DEAD-box helicase, OB fold | PF07717 | IPR011709 [Display all genes with this domain] |
| Pfam | 661 | 816 | DEAD/DEAH box helicase domain | PF00270 | IPR011545 [Display all genes with this domain] |
| PROSITE patterns | 773 | 782 | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site | PS00690 | IPR002464 [Display all genes with this domain] |
| Pfam | 1096 | 1127 | Helicase associated domain (HA2), winged-helix domain | PF04408 | IPR048333 [Display all genes with this domain] |
| SMART | 637 | 840 | Helicase superfamily 1/2, ATP-binding domain | SM00487 | IPR014001 [Display all genes with this domain] |
| PROSITE profiles | 658 | 831 | Helicase superfamily 1/2, ATP-binding domain | PS51192 | IPR014001 [Display all genes with this domain] |
| PROSITE profiles | 904 | 1072 | Helicase, C-terminal | PS51194 | IPR001650 [Display all genes with this domain] |
| Pfam | 906 | 1030 | Helicase, C-terminal | PF00271 | IPR001650 [Display all genes with this domain] |
| SMART | 931 | 1031 | Helicase, C-terminal | SM00490 | IPR001650 [Display all genes with this domain] |
| SMART | 1095 | 1188 | Helicase-associated domain | SM00847 | IPR007502 [Display all genes with this domain] |
| Gene3D | 593 | 832 | P-loop containing nucleoside triphosphate hydrolase | 3.40.50.300 | IPR027417 [Display all genes with this domain] |
| Superfamily | 652 | 1203 | P-loop containing nucleoside triphosphate hydrolase | SSF52540 | IPR027417 [Display all genes with this domain] |
| Gene3D | 889 | 1050 | P-loop containing nucleoside triphosphate hydrolase | 3.40.50.300 | IPR027417 [Display all genes with this domain] |
| Pfam | 451 | 536 | RWD domain | PF05773 | IPR006575 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| MobiDBLite | 1 | 58 |
| MobiDBLite | 183 | 220 |
| MobiDBLite | 183 | 228 |
| MobiDBLite | 594 | 630 |
| Seg | 19 | 34 |
| Seg | 126 | 137 |
| Seg | 190 | 204 |
| Seg | 281 | 291 |
| Seg | 314 | 319 |
| Seg | 323 | 334 |
| Seg | 443 | 454 |
| Seg | 786 | 798 |
| Seg | 1015 | 1031 |
| Seg | 1232 | 1251 |
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Ensembl Fungi release 60 - October 2024 © EMBL-EBI EMBL-EBI
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