Cenococcum geophilum 1.58 Assembly and Gene Annotation
About Cenococcum geophilum 1.58 (GCA_001692895.1)
Cenococcum geophilum Fr., synonym Cenococcum graniforme (Sow.) Ferd. and Winge, is an Ascomycete fungal species and is the only member in the genus Cenococcum. It is one of the most common ectomycorrhizal fungal species encountered in forest ecosystems. The geographic distribution of the species is notably cosmopolitan; it is found in ecosystems with a wide range of environmental conditions, and in many cases in high relative frequency. Because of its wide distribution and abundance in forest soils, it is one of the most well-studied ectomycorrhizal fungal species. While the species has long been known to be sterile and not produce asexual or sexual spores, cryptic sexual stages may exist. The hyphae produced by C. geophilum are characterized by their thick (1.5-8 um), straight and jet black appearance with little branching. They usually form monopodial (unbranched) ectomycorrhizas. The mantles of C. geophilum ectomycorrhizas are usually thick with few to many emanating hyphae.
(Text from Wikipedia and [image] (https://commons.wikimedia.org/wiki/File:Cenococcum_geophilum.jpg) from Wikipedia (http://en.wikipedia.org), the free encyclopaedia.
Assembly
The assembly presented has been imported from INSDC and has the assembly accession GCA_001692895.1.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession [GCA_001692895.1] (http://www.ebi.ac.uk/ena/data/view/GCA_001692895.1), with additional non-coding genes from Rfam. For more details, please visit INSDC annotation import.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
Assembly | Cenococcum geophilum 1.58 v2.0, INSDC Assembly GCA_001692895.1, |
Database version | 113.1 |
Golden Path Length | 177,557,160 |
Genebuild by | DOE Joint Genome Institute |
Genebuild method | Import |
Data source | DOE Joint Genome Institute |
Gene counts
Coding genes | 2,020 |
Non coding genes | 4 |
Small non coding genes | 4 |
Pseudogenes | 3 |
Gene transcripts | 2,027 |