Candida albicans GC75 (GCA_000773735) (Cand_albi_GC75_V1)

Candida albicans GC75 (GCA_000773735) Assembly and Gene Annotation

About Candida albicans GC75 (GCA_000773735)

Wikipedia

Candida albicans is an opportunistic pathogenic yeast It is one of the few species of the genus Candida that causes the human infection candidiasis, which results from an overgrowth of the fungus. Candidiasis is for example often observed in HIV-infected patients. C. albicans is the most common fungal species isolated from biofilms either formed on (permanent) implanted medical devices or on human tissue. A mortality rate of 40% has been reported for patients with systemic candidiasis due to C. albicans. By one estimate, invasive candidiasis contracted in a hospital causes 2800 to 11200 deaths yearly in the US.

C. albicans is commonly used as a model organism for biology. It is generally referred to as a dimorphic fungus since it grows both as yeast and filamentous cells. However it has several different morphological phenotypes. C. albicans was for a long time considered an obligate diploid organism without a haploid stage. This is however not the case. Next to a haploid stage C. albicans can also exist in a tetraploid stage. The latter is formed when diploid C. albicans cells mate when they are in the opaque form. The diploid genome size is approximately 29 Mb, and up to 70% of the protein coding genes have not yet been characterized. C. albicans is easily cultured in the lab and can be studied both in vivo and in vitro. Depending on the media different studies can be done as the media influences the morphological state of C. albicans. A special type of medium is CHROMagar™ Candida which can be used to identify different species of candida.

(Text from Wikipedia, the free encyclopaedia.)

Assembly

The assembly presented is the Cand_albi_GC75_V1 assembly submitted to INSDC with the assembly accession GCA_000773735.1.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_000773735.1, with additional non-coding genes derived from Rfam. For more details, please visit INSDC annotation import.

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

AssemblyCand_albi_GC75_V1, INSDC Assembly GCA_000773735.1,
Database version94.1
Base Pairs14,696,915
Golden Path Length14,696,915
Genebuild by06
Genebuild methodGenerated from ENA annotation
Data sourceEuropean Nucleotide Archive

Gene counts

Coding genes6,310
Non coding genes129
Small non coding genes129
Gene transcripts6,439

About this species