Bipolaris zeicola 26-R-13 Assembly and Gene Annotation
About Bipolaris zeicola 26-R-13 (GCA_000523435)
Cochliobolus carbonum (anamorph: Helminthosporium carbonum) is one of more than 40 species of filamentous ascomycetes belonging to the genus Cochliobolus (anamorph: Bipolaris/Curvularia). This pathogen has a worldwide distribution, with reports from Australia, Brazil, Cambodia, Canada, China, Congo, Denmark, Egypt, India, Kenya, New Zealand, Nigeria, Solomon Islands, and the United States. Cochliobolus carbonum is one of the most aggressive members of this genus infecting sorghum (Sorghum spp. 1), corn (Zea mays 2) and apple (Malus domestica 3). while the asexual stage causes Helminthosporium corn leaf spot. Cochliobolus carbonum is pathogenic to all organs of the corn plant including root, stalk, ear, kernel, and sheath. However, symptoms of infection show distinct manifestations in different plant parts: whole plant - seedling blight affects the whole plant, leaf discoloration and mycelial growth, black fungal spores and lesions appear on inflorescences and glumes, and grain covered with very dark brown to black mycelium which gives a characteristic charcoal appearance due to the production of conidia.
(Text from Wikipedia, the free encyclopaedia.)
Assembly
The assembly presented is the Cochliobolus carbonum v1.0 assembly submitted to INSDC with the assembly accession GCA_000523435.1.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_000523435.1, with additional non-coding genes derived from Rfam. For more details, please visit INSDC annotation import.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
Assembly | Cochliobolus carbonum v1.0, INSDC Assembly GCA_000523435.1, |
Database version | 113.1 |
Golden Path Length | 31,267,936 |
Genebuild by | JGI |
Genebuild method | Import |
Data source | JGI |
Gene counts
Coding genes | 12,853 |
Non coding genes | 177 |
Small non coding genes | 176 |
Long non coding genes | 1 |
Gene transcripts | 13,030 |