Aureobasidium namibiae CBS 147.97 (GCA_000721765) (Aureobasidium_pullulans_var._namibiae_CBS_147.97_v1.0)

Aureobasidium namibiae CBS 147.97 (GCA_000721765) Assembly and Gene Annotation

About Aureobasidium namibiae CBS 147.97 (GCA_000721765)

Wikipedia

Aureobasidium namibiae, formerly known as Aureobasidium pullulans var. namibiae is a ubiquitous black, yeast-like fungus. It was described on the basis of only one strain isolated from dolomitic marble in Namibia (hence its name namibiae).

The genome of A. namibiae (as well as other closely related species) contains unusually high numbers of genes for extracellular enzymes for carbohydrate degradation (CAZy) and proteases, MFS membrane sugar transporters, and alkali metal cation transporters (or ion transporters). Genes presumably involved in the synthesis of the biotechnologically important polysaccharide pullulan and siderophores were found, but the gene for antibiotic Aureobasidin A could not be identified. Genes possibly associated with the degradation of plastic and aromatic compounds are also present.

Due to the relatively recent redefinition of the species, most published work does not yet distinguish between the new species belonging to the previously recognised A. pullulans species complex. It is therefore not clear to what extent this knowledge is valid for A. namibiae.

(Text from Wikipedia, the free encyclopaedia.)

Assembly

The assembly presented is the Aureobasidium pullulans var. namibiae CBS 147.97 v1.0 assembly submitted to INSDC with the assembly accession GCA_000721765.1.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_000721765.1, with additional non-coding genes derived from Rfam. For more details, please visit INSDC annotation import.

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

AssemblyAureobasidium pullulans var. namibiae CBS 147.97 v1.0, INSDC Assembly GCA_000721765.1,
Database version100.1
Base Pairs25,427,801
Golden Path Length25,428,601
Genebuild by11
Genebuild methodImport
Data sourceEuropean Nucleotide Archive

Gene counts

Coding genes10,259
Non coding genes293
Small non coding genes291
Long non coding genes2
Gene transcripts10,552

About this species