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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
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- Transcript history
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Transcript: BAE62858

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Location

Chromosome 5: 3,347,805-3,350,021 forward strand.

About this transcript

This transcript has 3 exons and is annotated with 31 domains and features.

Gene

This transcript is a product of gene AO090120000255 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	BAE62858	2088	695aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2U6F7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	506	567	-	1.20.5.170	-
Pfam	4	78	Nucleoporin FG repeat	PF13634	IPR025574 [Display all genes with this domain]
Pfam	166	242	Nucleoporin FG repeat	PF13634	IPR025574 [Display all genes with this domain]
PANTHER	2	664	Nucleoporin NSP1/NUP62	PTHR12084	IPR026010 [Display all genes with this domain]
Pfam	464	570	Nucleoporin, NSP1-like, C-terminal	PF05064	IPR007758 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	33	121
MobiDBLite	33	224
MobiDBLite	137	224
MobiDBLite	258	272
MobiDBLite	258	477
MobiDBLite	283	301
MobiDBLite	311	360
MobiDBLite	373	389
MobiDBLite	402	458
Seg	39	63
Seg	65	86
Seg	153	173
Seg	191	207
Seg	260	274
Seg	279	296
Seg	317	338
Seg	341	363
Seg	369	397
Seg	403	471
Seg	664	677
Alphafold	1	695
Alphafold	1	695
Alphafold	1	695
Alphafold	1	695
Ncoils	529	549
Ncoils	589	609

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