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Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: CAL00259

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Location

SuperContig AM270986: 691,101-693,860 forward strand.

About this transcript

This transcript has 2 exons and is annotated with 38 domains and features.

Gene

This transcript is a product of gene An07g03250 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	CAL00259	2691	896aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2QMT5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	39	893	-	PTHR23172	-
Gene3D	246	313	-	1.10.8.10	-
CDD	270	301	-	cd14270	-
Superfamily	711	894	Chaperone J-domain superfamily	SSF46565	IPR036869 [Display all genes with this domain]
Gene3D	767	895	Chaperone J-domain superfamily	1.10.287.110	IPR036869 [Display all genes with this domain]
Gene3D	592	735	Tetratricopeptide-like helical domain superfamily	1.25.40.10	IPR011990 [Display all genes with this domain]
Superfamily	602	718	Tetratricopeptide-like helical domain superfamily	SSF48452	IPR011990 [Display all genes with this domain]
Superfamily	258	310	UBA-like superfamily	SSF46934	IPR009060 [Display all genes with this domain]
PROSITE profiles	264	306	Ubiquitin-associated domain	PS50030	IPR015940 [Display all genes with this domain]
SMART	266	305	Ubiquitin-associated domain	SM00165	IPR015940 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
MobiDBLite	1	21
MobiDBLite	1	277
MobiDBLite	28	84
MobiDBLite	85	103
MobiDBLite	123	147
MobiDBLite	172	196
MobiDBLite	237	257
MobiDBLite	299	374
MobiDBLite	309	341
MobiDBLite	347	374
MobiDBLite	394	583
MobiDBLite	405	425
MobiDBLite	459	498
MobiDBLite	551	567
MobiDBLite	738	775
Seg	70	83
Seg	164	180
Seg	212	226
Seg	239	250
Seg	255	264
Seg	552	578
Seg	612	621
Seg	740	759
Alphafold	1	896
Alphafold	1	896
Alphafold	1	896
Ncoils	73	102
Ncoils	781	801

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