Statistics on protein trees
The protein tree pipeline is described at the following page.
This page provides a summary of the Ensembl phylogenetic analysis of protein families. The following views are available:- Overview
- Gene tree coverage and Gene QC for each species
- Size of gene trees (split by their root taxon)
- Gene tree nodes, and the inference of speciation / duplication events
Gene tree coverage and Gene QC (per species)
Quick links: Agaricales, Atheliales, Blastocladiales, Boletales, Botryosphaeriales, Cantharellales, Chaetothyriomycetidae, Chytridiomycota, Corticiales, Cryptomycota, Culicosporidae, Dacrymycetales, Dothideomycetes, Dothideales, Erysiphales, Eurotiales, Geastrales, Georgefischeriales, Gloeophyllales, Glomerellales, Helotiales, Hymenochaetales, Hypocreales, Jaapiales, Magnaporthales, Microascales, Microbotryales, Microsporidia, Mixiales, Mortierellomycotina, Mucoromycotina, Myxotrichaceae, Nosematidae, Onygenales, Ophiostomatales, Orbiliales, Ordosporidae, Pezizales, Pleistophoridae, Pleosporales, Polyporales, Pucciniales, Rhizophydiales, Russulales, Saccharomycetales, Schizosaccharomycetales, Sclerotiniaceae, Sebacinales, Sordariales, Sordariomycetidae, Sporidiobolales, Taphrinomycotina, Tremellales, Tubulinosematidae, Ustilaginales, Verrucariales, Wallemiales, Xylariales, Fungi
Favourite species
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Saccharomyces cerevisiae (Saccharomyces cerevisiae S288C) | 6600 | 5564 | 1036 | 121 | 5443 | 356 | 0 | 0 | 0 | ||
| Schizosaccharomyces pombe (Schizosaccharomyces pombe 972h-) | 5145 | 4912 | 233 | 70 | 4842 | 192 | 0 | 0 | 0 | ||
| Aspergillus nidulans (Aspergillus nidulans FGSC A4) | 10534 | 9568 | 966 | 68 | 9500 | 253 | 0 | 0 | 0 | ||
| Puccinia graminis (Puccinia graminis f. sp. tritici CRL 75-36-700-3) | 15800 | 14543 | 1257 | 158 | 14385 | 1464 | 0 | 0 | 0 | ||
| Magnaporthe oryzae (Pyricularia oryzae 70-15 strain 75-15) | 12593 | 11470 | 1123 | 53 | 11417 | 225 | 0 | 0 | 0 | ||
| Zymoseptoria tritici (Zymoseptoria tritici IPO323) | 10931 | 9686 | 1245 | 65 | 9621 | 164 | 0 | 0 | 0 |
Agaricales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Fistulina hepatica ATCC 64428 (Fistulina hepatica ATCC 64428) | 9387 | 8243 | 1144 | 1068 | 7175 | 1890 | 0 | 0 | 0 | ||
| Leucoagaricus sp. SymC.cos (Leucoagaricus sp. SymC.cos) | 698 | 484 | 214 | 20 | 464 | 71 | 0 | 0 | 0 | ||
| Armillaria solidipes str. 28-4 (Armillaria solidipes) | 20808 | 18670 | 2138 | 390 | 18280 | 1239 | 0 | 0 | 0 | ||
| Schizophyllum commune H4-8 - GCA_000143185.2 (Schizophyllum commune H4-8) | 16173 | 12758 | 3415 | 2463 | 10295 | 3679 | 0 | 0 | 0 | ||
| Coprinopsis cinerea okayama7#130 (Coprinopsis cinerea okayama7#130) | 13355 | 11108 | 2247 | 1471 | 9637 | 2383 | 0 | 0 | 0 | ||
| Amanita thiersii Skay4041 (Amanita thiersii Skay4041) | 10346 | 9334 | 1012 | 1121 | 8213 | 1700 | 0 | 0 | 0 | ||
| Pleurotus ostreatus PC15 (Pleurotus ostreatus PC15) | 12296 | 10944 | 1352 | 982 | 9962 | 2265 | 0 | 0 | 0 | ||
| Amanita muscaria Koide BX008 (Amanita muscaria Koide BX008) | 18086 | 13617 | 4469 | 2860 | 10757 | 4770 | 0 | 0 | 0 | ||
| Cylindrobasidium torrendii FP15055 ss-10 (Cylindrobasidium torrendii FP15055 ss-10) | 13927 | 11859 | 2068 | 1928 | 9931 | 2891 | 0 | 0 | 0 | ||
| Hypholoma sublateritium FD-334 SS-4 (Hypholoma sublateritium FD-334 SS-4) | 17766 | 14099 | 3667 | 1742 | 12357 | 3464 | 0 | 0 | 0 | ||
| Agaricus bisporus var. burnettii JB137-S8 (Agaricus bisporus var. burnettii JB137-S8) | 11271 | 10061 | 1210 | 1697 | 8364 | 2597 | 0 | 0 | 0 | ||
| Gymnopus luxurians FD-317 M1 (Collybiopsis luxurians FD-317 M1) | 14594 | 12209 | 2385 | 3028 | 9181 | 5183 | 0 | 0 | 0 | ||
| Armillaria gallica str. Ar21-2 (Armillaria gallica) | 25695 | 22458 | 3237 | 1855 | 20603 | 4413 | 0 | 0 | 0 | ||
| Armillaria ostoyae (Armillaria ostoyae) | 22299 | 19592 | 2707 | 550 | 19042 | 2497 | 0 | 0 | 0 | ||
| Moniliophthora roreri MCA 2997 (Moniliophthora roreri MCA 2997) | 17910 | 15729 | 2181 | 2839 | 12890 | 5448 | 0 | 0 | 0 | ||
| Hebeloma cylindrosporum h7 (Hebeloma cylindrosporum h7) | 15373 | 12247 | 3126 | 728 | 11519 | 2203 | 0 | 0 | 0 | ||
| Termitomyces sp. J132 (Termitomyces sp. J132) | 11143 | 10511 | 632 | 1387 | 9124 | 2665 | 0 | 0 | 0 | ||
| Galerina marginata CBS 339.88 (Galerina marginata CBS 339.88) | 21388 | 17524 | 3864 | 2211 | 15313 | 5363 | 0 | 0 | 0 | ||
| Laccaria amethystina LaAM-08-1 (Laccaria amethystina LaAM-08-1) | 21020 | 15833 | 5187 | 3463 | 12370 | 5252 | 0 | 0 | 0 | ||
| Lentinula edodes str. G408PP-4 (Lentinula edodes) | 12051 | 10297 | 1754 | 857 | 9440 | 1985 | 0 | 0 | 0 | ||
| Hypsizygus marmoreus str. 51987-8 (Hypsizygus marmoreus) | 16627 | 13329 | 3298 | 1762 | 11567 | 2935 | 0 | 0 | 0 |
Atheliales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Piloderma croceum F 1598 (Piloderma croceum F 1598) | 21515 | 15912 | 5603 | 2083 | 13829 | 4574 | 0 | 0 | 0 | ||
| Fibularhizoctonia sp. CBS 109695 (Fibularhizoctonia sp. CBS 109695) | 32847 | 28164 | 4683 | 8941 | 19223 | 15077 | 0 | 0 | 0 |
Blastocladiales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Allomyces macrogynus ATCC 38327 (Allomyces macrogynus ATCC 38327) | 18774 | 16645 | 2129 | 5613 | 11032 | 9473 | 0 | 0 | 0 |
Boletales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Coniophora puteana RWD-64-598 SS2 (Coniophora puteana RWD-64-598 SS2) | 13758 | 12125 | 1633 | 1624 | 10501 | 3600 | 0 | 0 | 0 | ||
| Serpula lacrymans var. lacrymans S7.3 (Serpula lacrymans var. lacrymans S7.3) | 14481 | 11890 | 2591 | 2070 | 9820 | 3363 | 0 | 0 | 0 | ||
| Pisolithus microcarpus 441 (Pisolithus microcarpus 441) | 20968 | 16634 | 4334 | 2239 | 14395 | 6304 | 0 | 0 | 0 | ||
| Hydnomerulius pinastri MD-312 (Hydnomerulius pinastri MD-312) | 7912 | 7084 | 828 | 538 | 6546 | 1481 | 0 | 0 | 0 | ||
| Paxillus involutus ATCC 200175 (Paxillus involutus ATCC 200175) | 11700 | 10625 | 1075 | 1671 | 8954 | 4923 | 0 | 0 | 0 | ||
| Pisolithus tinctorius Marx 270 (Pisolithus tinctorius Marx 270) | 22644 | 18106 | 4538 | 3282 | 14824 | 7606 | 0 | 0 | 0 | ||
| Scleroderma citrinum Foug A (Scleroderma citrinum Foug A) | 20990 | 16006 | 4984 | 2204 | 13802 | 6083 | 0 | 0 | 0 | ||
| Suillus luteus UH-Slu-Lm8-n1 (Suillus luteus UH-Slu-Lm8-n1) | 18297 | 13998 | 4299 | 1303 | 12695 | 3755 | 0 | 0 | 0 | ||
| Rhizopogon vesiculosus str. AM-OR11-056 (Rhizopogon vesiculosus) | 14191 | 12115 | 2076 | 1563 | 10552 | 3284 | 0 | 0 | 0 |
Botryosphaeriales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Macrophomina phaseolina MS6 (Macrophomina phaseolina MS6) | 13806 | 11279 | 2527 | 175 | 11104 | 506 | 0 | 0 | 0 | ||
| Neofusicoccum parvum UCRNP2 (Neofusicoccum parvum UCRNP2) | 10366 | 9694 | 672 | 17 | 9677 | 156 | 0 | 0 | 0 |
Cantharellales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Tulasnella calospora MUT 4182 (Tulasnella calospora MUT 4182) | 19545 | 15389 | 4156 | 4760 | 10629 | 7179 | 0 | 0 | 0 | ||
| Rhizoctonia solani AG-1 IA str. AG1 IA (Rhizoctonia solani AG-1 IA) | 10489 | 6449 | 4040 | 644 | 5805 | 998 | 0 | 0 | 0 | ||
| Botryobasidium botryosum FD-172 SS1 (Botryobasidium botryosum FD-172 SS1) | 16501 | 13276 | 3225 | 2828 | 10448 | 4897 | 0 | 0 | 0 |
Chaetothyriomycetidae
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Phialophora americana str. CBS 27337 (Phialophora americana) | 10919 | 10363 | 556 | 8 | 10355 | 26 | 0 | 0 | 0 | ||
| Cladophialophora carrionii str. KSF (Cladophialophora carrionii) | 11181 | 10091 | 1090 | 4 | 10087 | 28 | 0 | 0 | 0 | ||
| Rhinocladiella mackenziei CBS 650.93 (Rhinocladiella mackenziei CBS 650.93) | 11382 | 10603 | 779 | 86 | 10517 | 310 | 0 | 0 | 0 | ||
| Cyphellophora europaea CBS 101466 (Cyphellophora europaea CBS 101466) | 11094 | 10155 | 939 | 81 | 10074 | 257 | 0 | 0 | 0 | ||
| Fonsecaea erecta (Fonsecaea erecta) | 12090 | 11266 | 824 | 98 | 11168 | 204 | 0 | 0 | 0 | ||
| Capronia epimyces CBS 606.96 (Capronia epimyces CBS 606.96) | 10469 | 9989 | 480 | 11 | 9978 | 86 | 0 | 0 | 0 | ||
| Exophiala aquamarina CBS 119918 (Exophiala aquamarina CBS 119918) | 13118 | 12395 | 723 | 23 | 12372 | 335 | 0 | 0 | 0 | ||
| Phaeomoniella chlamydospora (Phaeomoniella chlamydospora) | 6907 | 6484 | 423 | 10 | 6474 | 55 | 0 | 0 | 0 |
Chytridiomycota
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Spizellomyces punctatus DAOM BR117 (Spizellomyces punctatus DAOM BR117) | 8950 | 7175 | 1775 | 355 | 6820 | 570 | 0 | 0 | 0 | ||
| Gonapodya prolifera JEL478 (Gonapodya prolifera JEL478) | 13827 | 9282 | 4545 | 2097 | 7185 | 2854 | 0 | 0 | 0 | ||
| Neocallimastix californiae str. G1 (Neocallimastix californiae) | 20200 | 18516 | 1684 | 2044 | 16472 | 8108 | 0 | 0 | 0 | ||
| Rhizoclosmatium globosum str. JEL800 (Rhizoclosmatium globosum) | 16987 | 12438 | 4549 | 4275 | 8163 | 5393 | 0 | 0 | 0 | ||
| Anaeromyces robustus str. S4 (Anaeromyces robustus) | 12823 | 11466 | 1357 | 862 | 10604 | 2426 | 0 | 0 | 0 | ||
| Piromyces finnis (Piromyces finnis) | 10959 | 10087 | 872 | 433 | 9654 | 1491 | 0 | 0 | 0 |
Corticiales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Punctularia strigosozonata HHB-11173 SS5 (Punctularia strigosozonata HHB-11173 SS5) | 2097 | 1737 | 360 | 203 | 1534 | 399 | 0 | 0 | 0 |
Cryptomycota
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Paramicrosporidium saccamoebae str. KSL3 (Paramicrosporidium saccamoebae) | 3766 | 2614 | 1152 | 359 | 2255 | 326 | 0 | 0 | 0 | ||
| Rozella allomycis CSF55 (Rozella allomycis CSF55) | 6350 | 4083 | 2267 | 654 | 3429 | 582 | 0 | 0 | 0 |
Culicosporidae
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Edhazardia aedis USNM 41457 (Edhazardia aedis USNM 41457) | 4190 | 1981 | 2209 | 612 | 1369 | 508 | 0 | 0 | 0 |
Dacrymycetales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Calocera cornea HHB12733 (Calocera cornea HHB12733) | 13152 | 10990 | 2162 | 606 | 10384 | 1500 | 0 | 0 | 0 | ||
| Dacryopinax primogenitus str. DJM-731 SS1 (Dacryopinax primogenitus) | 10240 | 8997 | 1243 | 448 | 8549 | 900 | 0 | 0 | 0 | ||
| Calocera viscosa TUFC12733 (Calocera viscosa TUFC12733) | 12357 | 10681 | 1676 | 377 | 10304 | 1317 | 0 | 0 | 0 |
Dothideomycetes
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Rachicladosporium antarcticum (Cryoendolithus antarcticus) | 18781 | 18320 | 461 | 95 | 18225 | 1496 | 0 | 0 | 0 | ||
| Zymoseptoria tritici (Zymoseptoria tritici IPO323) | 10931 | 9686 | 1245 | 65 | 9621 | 164 | 0 | 0 | 0 | ||
| Elsinoe australis str. NL1 (Elsinoe australis) | 9223 | 8206 | 1017 | 123 | 8083 | 265 | 0 | 0 | 0 | ||
| Acidomyces richmondensis BFW (Acidomyces richmondensis BFW) | 11177 | 9561 | 1616 | 790 | 8771 | 850 | 0 | 0 | 0 | ||
| Ramularia collo-cygni (Ramularia collo-cygni) | 11502 | 9901 | 1601 | 212 | 9689 | 219 | 0 | 0 | 0 | ||
| Zymoseptoria brevis str. Zb18110 (Zymoseptoria brevis) | 10566 | 9860 | 706 | 52 | 9808 | 147 | 0 | 0 | 0 | ||
| Dothistroma septosporum (Dothistroma septosporum NZE10) | 12400 | 9636 | 2764 | 63 | 9573 | 116 | 0 | 0 | 0 | ||
| Baudoinia panamericana UAMH 10762 (Baudoinia panamericana UAMH 10762) | 10508 | 8268 | 2240 | 26 | 8242 | 60 | 0 | 0 | 0 | ||
| Sphaerulina musiva SO2202 (Sphaerulina musiva SO2202) | 10156 | 8830 | 1326 | 108 | 8722 | 128 | 0 | 0 | 0 | ||
| Coniosporium apollinis CBS 100218 str. CBS 352.97 (Coniosporium apollinis CBS 100218) | 9308 | 8383 | 925 | 84 | 8299 | 143 | 0 | 0 | 0 | ||
| Pseudocercospora musae str. CBS 116634 (Pseudocercospora musae) | 10402 | 8444 | 1958 | 30 | 8414 | 83 | 0 | 0 | 0 | ||
| Hortaea werneckii EXF-2000 (Hortaea werneckii EXF-2000) | 15620 | 15191 | 429 | 245 | 14946 | 6700 | 0 | 0 | 0 | ||
| Rachicladosporium sp. CCFEE 5018 (Rachicladosporium sp. CCFEE 5018) | 18892 | 18194 | 698 | 204 | 17990 | 2742 | 0 | 0 | 0 | ||
| Pseudocercospora fijiensis CIRAD86 (Pseudocercospora fijiensis CIRAD86) | 13047 | 10307 | 2740 | 57 | 10250 | 110 | 0 | 0 | 0 | ||
| Cercospora berteroae (Cercospora berteroae) | 11903 | 10787 | 1116 | 216 | 10571 | 285 | 0 | 0 | 0 |
Dothideales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Aureobasidium melanogenum CBS 110374 (Aureobasidium melanogenum CBS 110374) | 10584 | 9242 | 1342 | 367 | 8875 | 497 | 0 | 0 | 0 |
Erysiphales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Erysiphe pulchra (Erysiphe pulchra) | 6859 | 6662 | 197 | 79 | 6583 | 868 | 0 | 0 | 0 | ||
| Blumeria graminis (Blumeria hordei DH14 strain f. sp. hordei DH14) | 7118 | 6601 | 517 | 815 | 5786 | 1093 | 0 | 0 | 0 | ||
| Erysiphe necator (Erysiphe necator) | 6484 | 6256 | 228 | 187 | 6069 | 722 | 0 | 0 | 0 |
Eurotiales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Aspergillus clavatus NRRL 1 (Aspergillus clavatus NRRL 1) | 9121 | 8731 | 390 | 6 | 8725 | 26 | 0 | 0 | 0 | ||
| Aspergillus nidulans (Aspergillus nidulans FGSC A4) | 10534 | 9568 | 966 | 68 | 9500 | 253 | 0 | 0 | 0 | ||
| Talaromyces stipitatus ATCC 10500 (Talaromyces stipitatus ATCC 10500) | 12457 | 11704 | 753 | 336 | 11368 | 1341 | 0 | 0 | 0 | ||
| Aspergillus oryzae RIB40 (Aspergillus oryzae RIB40 strain RIB 40) | 12074 | 11329 | 745 | 30 | 11299 | 79 | 0 | 0 | 0 | ||
| Aspergillus fischeri NRRL 181 - GCA_000149645.4 (Aspergillus fischeri NRRL 181) | 10389 | 10074 | 315 | 24 | 10050 | 82 | 0 | 0 | 0 | ||
| Aspergillus niger (Aspergillus niger) | 13872 | 10568 | 3304 | 42 | 10526 | 210 | 0 | 0 | 0 | ||
| Talaromyces atroroseus str. IBT 11181 (Talaromyces atroroseus) | 9523 | 9135 | 388 | 20 | 9115 | 61 | 0 | 0 | 0 | ||
| Aspergillus flavus NRRL3357 - GCA_000006275.3 (Aspergillus flavus NRRL3357) | 14304 | 12623 | 1681 | 10 | 12613 | 92 | 0 | 0 | 0 | ||
| Penicillium antarcticum (Penicillium antarcticum) | 11514 | 10269 | 1245 | 281 | 9988 | 659 | 0 | 0 | 0 | ||
| Talaromyces islandicus (Talaromyces islandicus) | 9927 | 9507 | 420 | 54 | 9453 | 154 | 0 | 0 | 0 | ||
| Aspergillus terreus NIH2624 (Aspergillus terreus NIH2624) | 10401 | 9817 | 584 | 9 | 9808 | 121 | 0 | 0 | 0 | ||
| Aspergillus fumigatus - GCA_000002655.1 (Aspergillus fumigatus Af293) | 10124 | 10009 | 115 | 23 | 9986 | 103 | 0 | 0 | 0 | ||
| Elaphomyces granulatus str. OSC145934 (Elaphomyces granulatus) | 7171 | 6710 | 461 | 69 | 6641 | 411 | 0 | 0 | 0 | ||
| Aspergillus fumigatus A1163 (Aspergillus fumigatus A1163) | 9929 | 9651 | 278 | 6 | 9645 | 41 | 0 | 0 | 0 | ||
| Rasamsonia emersonii CBS 393.64 (Rasamsonia emersonii CBS 393.64) | 9843 | 8384 | 1459 | 99 | 8285 | 224 | 0 | 0 | 0 | ||
| Penicilliopsis zonata CBS 506.65 (Penicilliopsis zonata CBS 506.65) | 9869 | 8884 | 985 | 45 | 8839 | 190 | 0 | 0 | 0 | ||
| Byssochlamys spectabilis No. 5 str. Paecilomyces variotii No. 5 (NBRC109023) (Paecilomyces variotii No. 5) | 8877 | 8459 | 418 | 12 | 8447 | 77 | 0 | 0 | 0 |
Geastrales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Sphaerobolus stellatus SS14 (Sphaerobolus stellatus SS14) | 25075 | 21812 | 3263 | 9265 | 12547 | 12766 | 0 | 0 | 0 |
Georgefischeriales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Tilletiaria anomala UBC 951 (Tilletiaria anomala UBC 951) | 6808 | 5332 | 1476 | 71 | 5261 | 103 | 0 | 0 | 0 |
Gloeophyllales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Neolentinus lepideus HHB14362 ss-1 (Neolentinus lepideus HHB14362 ss-1) | 13155 | 11353 | 1802 | 878 | 10475 | 1715 | 0 | 0 | 0 | ||
| Gloeophyllum trabeum ATCC 11539 (Gloeophyllum trabeum ATCC 11539) | 11755 | 10741 | 1014 | 428 | 10313 | 1214 | 0 | 0 | 0 |
Glomerellales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Colletotrichum gloeosporioides (Colletotrichum fructicola Nara gc5) | 15381 | 14345 | 1036 | 92 | 14253 | 347 | 0 | 0 | 0 | ||
| Colletotrichum orbiculare (Colletotrichum orbiculare MAFF 240422) | 13346 | 11831 | 1515 | 27 | 11804 | 90 | 0 | 0 | 0 | ||
| Verticillium dahliae (Verticillium dahliae VdLs.17) | 10535 | 10192 | 343 | 5 | 10187 | 42 | 0 | 0 | 0 | ||
| Colletotrichum graminicola (Colletotrichum graminicola M1.001) | 12020 | 10953 | 1067 | 25 | 10928 | 69 | 0 | 0 | 0 | ||
| Colletotrichum higginsianum (Colletotrichum higginsianum strain IMI 349063) | 16141 | 13387 | 2754 | 133 | 13254 | 1036 | 0 | 0 | 0 | ||
| Verticillium longisporum (Verticillium longisporum) | 21072 | 18332 | 2740 | 306 | 18026 | 4502 | 0 | 0 | 0 | ||
| Verticillium dahliae JR2 (Verticillium dahliae JR2) | 11391 | 10124 | 1267 | 19 | 10105 | 56 | 0 | 0 | 0 |
Helotiales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Amorphotheca resinae ATCC 22711 (Amorphotheca resinae ATCC 22711) | 9642 | 8295 | 1347 | 50 | 8245 | 68 | 0 | 0 | 0 | ||
| Rutstroemia sp. NJR-2017a BBW (Rutstroemia sp. NJR-2017a BBW) | 10975 | 10193 | 782 | 103 | 10090 | 397 | 0 | 0 | 0 | ||
| Phialocephala subalpina (Phialocephala subalpina) | 20173 | 17966 | 2207 | 133 | 17833 | 634 | 0 | 0 | 0 | ||
| Diplocarpon rosae (Diplocarpon rosae) | 13761 | 13419 | 342 | 171 | 13248 | 5855 | 0 | 0 | 0 | ||
| Glarea lozoyensis ATCC 20868 str. 1224 (Glarea lozoyensis ATCC 20868) | 13083 | 11156 | 1927 | 228 | 10928 | 331 | 0 | 0 | 0 | ||
| Marssonina brunnea f. sp. 'multigermtubi' MB_m1 (Drepanopeziza brunnea f. sp. 'multigermtubi' MB_m1) | 10027 | 8814 | 1213 | 400 | 8414 | 517 | 0 | 0 | 0 | ||
| Rhynchosporium agropyri (Rhynchosporium agropyri) | 13673 | 10850 | 2823 | 138 | 10712 | 249 | 0 | 0 | 0 | ||
| Cadophora sp. DSE1049 (Cadophora sp. DSE1049) | 22762 | 19276 | 3486 | 576 | 18700 | 1469 | 0 | 0 | 0 | ||
| Pezoloma ericae str. UAMH 7357 (Hyaloscypha hepaticicola) | 16783 | 13375 | 3408 | 321 | 13054 | 582 | 0 | 0 | 0 | ||
| Phialocephala scopiformis str. CBS 120377 (Mollisia scopiformis) | 18567 | 15883 | 2684 | 138 | 15745 | 443 | 0 | 0 | 0 |
Hymenochaetales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Fomitiporia mediterranea MF3/22 (Fomitiporia mediterranea MF3/22) | 533 | 414 | 119 | 147 | 267 | 184 | 0 | 0 | 0 | ||
| Schizopora paradoxa str. KUC8140 (Schizopora paradoxa) | 17088 | 13637 | 3451 | 3305 | 10332 | 4789 | 0 | 0 | 0 |
Hypocreales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Sporothrix insectorum RCEF 264 (Niveomyces insectorum RCEF 264) | 9496 | 8889 | 607 | 49 | 8840 | 196 | 0 | 0 | 0 | ||
| Moelleriella libera RCEF 2490 (Moelleriella libera RCEF 2490) | 8461 | 7818 | 643 | 22 | 7796 | 71 | 0 | 0 | 0 | ||
| Trichoderma reesei - GCA_000167675.2 (Trichoderma reesei QM6a) | 9125 | 8736 | 389 | 5 | 8731 | 12 | 0 | 0 | 0 | ||
| Trichoderma atroviride IMI 206040 (Trichoderma atroviride IMI 206040) | 11771 | 10823 | 948 | 6 | 10817 | 41 | 0 | 0 | 0 | ||
| Claviceps purpurea 20.1 (Claviceps purpurea 20.1) | 8823 | 8217 | 606 | 462 | 7755 | 1268 | 0 | 0 | 0 | ||
| Ophiocordyceps australis (Ophiocordyceps australis) | 7992 | 7221 | 771 | 34 | 7187 | 104 | 0 | 0 | 0 | ||
| Drechmeria coniospora str. ARSEF 6962 (Drechmeria coniospora) | 8236 | 7316 | 920 | 179 | 7137 | 295 | 0 | 0 | 0 | ||
| Purpureocillium lilacinum (Purpureocillium lilacinum) | 11773 | 9804 | 1969 | 77 | 9727 | 322 | 0 | 0 | 0 | ||
| Neonectria ditissima str. R09/05 (Neonectria ditissima) | 12685 | 11894 | 791 | 54 | 11840 | 171 | 0 | 0 | 0 | ||
| Escovopsis weberi (Escovopsis weberi) | 6870 | 6436 | 434 | 10 | 6426 | 9 | 0 | 0 | 0 | ||
| Hirsutella minnesotensis 3608 (Hirsutella minnesotensis 3608) | 9390 | 8716 | 674 | 313 | 8403 | 2207 | 0 | 0 | 0 | ||
| Fusarium pseudograminearum (Fusarium pseudograminearum CS3096) | 12448 | 11928 | 520 | 4 | 11924 | 13 | 0 | 0 | 0 | ||
| Torrubiella hemipterigena str. BCC 1449 ([Torrubiella] hemipterigena) | 10773 | 10099 | 674 | 166 | 9933 | 671 | 0 | 0 | 0 | ||
| Fusarium graminearum - GCA_900044135.1 (Fusarium graminearum PH-1) | 14194 | 13197 | 997 | 2 | 13195 | 22 | 0 | 0 | 0 | ||
| Tolypocladium capitatum str. CBS 113982 (Tolypocladium capitatum) | 7534 | 7118 | 416 | 4 | 7114 | 31 | 0 | 0 | 0 | ||
| Metarhizium rileyi RCEF 4871 (Metarhizium rileyi RCEF 4871) | 8764 | 8291 | 473 | 6 | 8285 | 57 | 0 | 0 | 0 | ||
| Ustilaginoidea virens str. UV-8b (Ustilaginoidea virens) | 8426 | 7030 | 1396 | 96 | 6934 | 131 | 0 | 0 | 0 | ||
| Ophiocordyceps camponoti-rufipedis (Ophiocordyceps camponoti-rufipedis) | 7618 | 6648 | 970 | 52 | 6596 | 100 | 0 | 0 | 0 | ||
| Fusarium fujikuroi (Fusarium fujikuroi strain IMI 58289) | 14815 | 14202 | 613 | 29 | 14173 | 106 | 0 | 0 | 0 | ||
| Fusarium oxysporum (Fusarium oxysporum f. sp. lycopersici 4287) | 17696 | 16493 | 1203 | 645 | 15848 | 1976 | 0 | 0 | 0 | ||
| Stachybotrys chartarum IBT 40288 (Stachybotrys chartarum IBT 40288) | 11368 | 10660 | 708 | 42 | 10618 | 135 | 0 | 0 | 0 | ||
| Tolypocladium paradoxum str. NRBC 100945 (Tolypocladium paradoxum) | 8913 | 8276 | 637 | 7 | 8269 | 55 | 0 | 0 | 0 | ||
| Metarhizium acridum CQMa 102 (Metarhizium acridum CQMa 102) | 9849 | 9433 | 416 | 16 | 9417 | 119 | 0 | 0 | 0 | ||
| Pochonia chlamydosporia 170 (Pochonia chlamydosporia 170) | 14204 | 12031 | 2173 | 139 | 11892 | 641 | 0 | 0 | 0 | ||
| Acremonium chrysogenum ATCC 11550 (Hapsidospora chrysogenum ATCC 11550) | 8901 | 8121 | 780 | 4 | 8117 | 54 | 0 | 0 | 0 | ||
| Tolypocladium ophioglossoides CBS 100239 (Tolypocladium ophioglossoides CBS 100239) | 9158 | 8542 | 616 | 21 | 8521 | 106 | 0 | 0 | 0 | ||
| Beauveria bassiana (Beauveria bassiana strain ARSEF 8028) | 10095 | 9353 | 742 | 53 | 9300 | 256 | 0 | 0 | 0 | ||
| Fusarium verticillioides (Fusarium verticillioides 7600) | 14166 | 12995 | 1171 | 14 | 12981 | 23 | 0 | 0 | 0 | ||
| Stachybotrys chlorohalonata IBT 40285 (Stachybotrys chlorohalonata IBT 40285) | 10706 | 10098 | 608 | 28 | 10070 | 97 | 0 | 0 | 0 | ||
| Fusarium solani (Fusarium vanettenii 77-13-4 strain MPVI 77-13-4) | 15705 | 14872 | 833 | 112 | 14760 | 506 | 0 | 0 | 0 | ||
| Trichoderma asperellum CBS 433.97 (Trichoderma asperellum CBS 433.97) | 12556 | 10778 | 1778 | 26 | 10752 | 106 | 0 | 0 | 0 | ||
| Fusarium culmorum UK99 (Fusarium culmorum CS7071 strain UK99) | 12465 | 11828 | 637 | 30 | 11798 | 89 | 0 | 0 | 0 | ||
| Trichoderma virens (Trichoderma virens Gv29-8) | 12400 | 11527 | 873 | 10 | 11517 | 168 | 0 | 0 | 0 |
Jaapiales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Jaapia argillacea MUCL 33604 (Jaapia argillacea MUCL 33604) | 16373 | 13983 | 2390 | 2016 | 11967 | 3989 | 0 | 0 | 0 |
Magnaporthales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Magnaporthe oryzae (Pyricularia oryzae 70-15 strain 75-15) | 12593 | 11470 | 1123 | 53 | 11417 | 225 | 0 | 0 | 0 | ||
| Magnaporthe oryzae (Pyricularia oryzae strain BR32) | 14349 | 12429 | 1920 | 176 | 12253 | 455 | 0 | 0 | 0 | ||
| Gaeumannomyces tritici R3-111a-1 (Gaeumannomyces tritici R3-111a-1) | 14458 | 11173 | 3285 | 453 | 10720 | 638 | 0 | 0 | 0 | ||
| Magnaporthe poae (Magnaporthiopsis poae ATCC 64411) | 11209 | 8929 | 2280 | 42 | 8887 | 146 | 0 | 0 | 0 |
Microascales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Lomentospora prolificans str. JHH-5317 (Lomentospora prolificans) | 8560 | 8343 | 217 | 12 | 8331 | 129 | 0 | 0 | 0 | ||
| Ceratocystis platani str. CFO (Ceratocystis platani) | 5622 | 5232 | 390 | 208 | 5024 | 342 | 0 | 0 | 0 | ||
| Scedosporium apiospermum str. IHEM 14462 (Scedosporium apiospermum) | 8376 | 8032 | 344 | 29 | 8003 | 127 | 0 | 0 | 0 | ||
| Thielaviopsis punctulata (Thielaviopsis punctulata) | 5296 | 5265 | 31 | 0 | 5265 | 59 | 0 | 0 | 0 |
Microbotryales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Microbotryum violaceum (Microbotryum lychnidis-dioicae p1A1 Lamole) | 7364 | 6654 | 710 | 512 | 6142 | 635 | 0 | 0 | 0 |
Microsporidia
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Amphiamblys sp. WSBS2006 (Amphiamblys sp. WSBS2006) | 3642 | 2568 | 1074 | 1325 | 1243 | 1233 | 0 | 0 | 0 | ||
| Enterocytozoon bieneusi H348 (Enterocytozoon bieneusi H348) | 3632 | 2932 | 700 | 697 | 2235 | 1507 | 0 | 0 | 0 | ||
| Pseudoloma neurophilia str. MK1 (Pseudoloma neurophilia) | 3644 | 2282 | 1362 | 619 | 1663 | 691 | 0 | 0 | 0 | ||
| Enterospora canceri str. GB1 (Enterospora canceri) | 2169 | 1640 | 529 | 317 | 1323 | 319 | 0 | 0 | 0 | ||
| Hepatospora eriocheir str. canceri (Hepatospora eriocheir) | 3052 | 1954 | 1098 | 823 | 1131 | 696 | 0 | 0 | 0 | ||
| Spraguea lophii 42_110 (Spraguea lophii 42_110) | 2499 | 1659 | 840 | 256 | 1403 | 270 | 0 | 0 | 0 | ||
| Nematocida displodere str. JUm2807 (Nematocida displodere) | 2278 | 1223 | 1055 | 292 | 931 | 256 | 0 | 0 | 0 | ||
| Enterocytozoon hepatopenaei str. TH1 (Ecytonucleospora hepatopenaei) | 2536 | 1789 | 747 | 275 | 1514 | 328 | 0 | 0 | 0 |
Mixiales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mixia osmundae IAM 14324 (Mixia osmundae IAM 14324) | 6726 | 5496 | 1230 | 401 | 5095 | 529 | 0 | 0 | 0 |
Mortierellomycotina
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Linnemannia elongata AG-77 (Linnemannia elongata AG-77) | 14959 | 12388 | 2571 | 1275 | 11113 | 2867 | 0 | 0 | 0 | ||
| Lobosporangium transversale str. NRRL 3116 (Lobosporangium transversale) | 11818 | 10439 | 1379 | 943 | 9496 | 1793 | 0 | 0 | 0 | ||
| Podila verticillata NRRL 6337 (Podila verticillata NRRL 6337) | 1508 | 1309 | 199 | 113 | 1196 | 194 | 0 | 0 | 0 |
Mucoromycotina
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Lichtheimia corymbifera JMRC:FSU:9682 (Lichtheimia corymbifera JMRC:FSU:9682) | 12282 | 11119 | 1163 | 691 | 10428 | 1078 | 0 | 0 | 0 | ||
| Syncephalastrum racemosum str. NRRL 2496 (Syncephalastrum racemosum) | 11121 | 9612 | 1509 | 499 | 9113 | 832 | 0 | 0 | 0 | ||
| Lichtheimia ramosa str. JMRC:FSU:6197 (Lichtheimia ramosa) | 11510 | 11204 | 306 | 42 | 11162 | 382 | 0 | 0 | 0 | ||
| Mucor ambiguus str. NBRC 6742 (Mucor ambiguus) | 11343 | 10464 | 879 | 558 | 9906 | 854 | 0 | 0 | 0 | ||
| Bifiguratus adelaidae str. AZ0501 (Bifiguratus adelaidae) | 5719 | 4835 | 884 | 120 | 4715 | 427 | 0 | 0 | 0 | ||
| Hesseltinella vesiculosa str. NRRL 3301 (Hesseltinella vesiculosa) | 11139 | 9851 | 1288 | 909 | 8942 | 1212 | 0 | 0 | 0 | ||
| Rhizopus microsporus str. CBS-344.29 (Rhizopus microsporus) | 19564 | 18478 | 1086 | 1484 | 16994 | 7846 | 0 | 0 | 0 | ||
| Rhizopus delemar RA 99-880 (Rhizopus delemar RA 99-880) | 17459 | 15234 | 2225 | 1655 | 13579 | 5742 | 0 | 0 | 0 | ||
| Absidia repens str. NRRL 1336 (Absidia repens) | 14915 | 13263 | 1652 | 1056 | 12207 | 3945 | 0 | 0 | 0 | ||
| Choanephora cucurbitarum str. KUS-F28377 (Choanephora cucurbitarum) | 11977 | 10538 | 1439 | 806 | 9732 | 1280 | 0 | 0 | 0 |
Myxotrichaceae
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Oidiodendron maius Zn (Oidiodendron maius Zn) | 16701 | 14696 | 2005 | 204 | 14492 | 958 | 0 | 0 | 0 |
Nosematidae
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nosema apis BRL 01 (Vairimorpha apis BRL 01) | 2764 | 2066 | 698 | 647 | 1419 | 669 | 0 | 0 | 0 | ||
| Vittaforma corneae ATCC 50505 (Vittaforma corneae ATCC 50505) | 2238 | 1639 | 599 | 202 | 1437 | 210 | 0 | 0 | 0 |
Onygenales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Coccidioides posadasii str. Silveira (Coccidioides posadasii str. Silveira) | 10225 | 8574 | 1651 | 56 | 8518 | 158 | 0 | 0 | 0 | ||
| Emmonsia crescens UAMH 3008 (Emmonsia crescens UAMH 3008) | 9444 | 8381 | 1063 | 73 | 8308 | 158 | 0 | 0 | 0 | ||
| Uncinocarpus reesii 1704 str. UAMH 1704 (Uncinocarpus reesii 1704) | 7760 | 7027 | 733 | 42 | 6985 | 54 | 0 | 0 | 0 | ||
| Blastomyces dermatitidis ER-3 (Blastomyces dermatitidis ER-3) | 9755 | 8636 | 1119 | 858 | 7778 | 947 | 0 | 0 | 0 | ||
| Helicocarpus griseus UAMH5409 (Helicocarpus griseus UAMH5409) | 10224 | 9449 | 775 | 90 | 9359 | 206 | 0 | 0 | 0 | ||
| Histoplasma capsulatum (Histoplasma ohiense (nom. inval.) strain G217B) | 11221 | 8733 | 2488 | 1211 | 7522 | 1340 | 0 | 0 | 0 | ||
| Microsporum canis CBS 113480 (Microsporum canis CBS 113480) | 8765 | 8028 | 737 | 2 | 8026 | 59 | 0 | 0 | 0 | ||
| Polytolypa hystricis UAMH7299 (Polytolypa hystricis UAMH7299) | 9934 | 8802 | 1132 | 64 | 8738 | 141 | 0 | 0 | 0 | ||
| Trichophyton equinum CBS 127.97 (Trichophyton equinum CBS 127.97) | 8676 | 7633 | 1043 | 35 | 7598 | 69 | 0 | 0 | 0 | ||
| Paracoccidioides brasiliensis Pb18 (Paracoccidioides brasiliensis Pb18) | 8390 | 6922 | 1468 | 28 | 6894 | 83 | 0 | 0 | 0 | ||
| Ascosphaera apis ARSEF 7405 (Ascosphaera apis ARSEF 7405) | 6442 | 5564 | 878 | 124 | 5440 | 198 | 0 | 0 | 0 | ||
| Nannizzia gypsea CBS 118893 (Nannizzia gypsea CBS 118893) | 8921 | 8035 | 886 | 13 | 8022 | 48 | 0 | 0 | 0 | ||
| Coccidioides immitis H538.4 (Coccidioides immitis H538.4) | 10538 | 8423 | 2115 | 22 | 8401 | 95 | 0 | 0 | 0 |
Ophiostomatales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Sporothrix brasiliensis 5110 (Sporothrix brasiliensis 5110) | 9091 | 8681 | 410 | 4 | 8677 | 31 | 0 | 0 | 0 | ||
| Sporothrix schenckii ATCC 58251 (Sporothrix schenckii ATCC 58251) | 8674 | 8571 | 103 | 0 | 8571 | 10 | 0 | 0 | 0 | ||
| Grosmannia clavigera kw1407 (Grosmannia clavigera kw1407) | 8312 | 7690 | 622 | 8 | 7682 | 78 | 0 | 0 | 0 | ||
| Ophiostoma piceae UAMH 11346 str. UAMH-11346 (Ophiostoma piceae UAMH 11346) | 8884 | 8240 | 644 | 27 | 8213 | 74 | 0 | 0 | 0 |
Orbiliales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Dactylellina haptotyla CBS 200.50 (Dactylellina haptotyla CBS 200.50) | 10959 | 9886 | 1073 | 135 | 9751 | 430 | 0 | 0 | 0 | ||
| Drechslerella stenobrocha 248 (Drechslerella stenobrocha 248) | 5597 | 5236 | 361 | 4 | 5232 | 12 | 0 | 0 | 0 | ||
| Arthrobotrys oligospora ATCC 24927 (Orbilia oligospora ATCC 24927) | 11479 | 10024 | 1455 | 229 | 9795 | 512 | 0 | 0 | 0 |
Ordosporidae
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Ordospora colligata OC4 (Ordospora colligata OC4) | 1820 | 1429 | 391 | 13 | 1416 | 34 | 0 | 0 | 0 |
Pezizales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Tuber borchii str. Tbo3840 (Tuber borchii) | 12345 | 10079 | 2266 | 985 | 9094 | 2208 | 0 | 0 | 0 | ||
| Tuber magnatum (Tuber magnatum) | 9431 | 8381 | 1050 | 544 | 7837 | 909 | 0 | 0 | 0 | ||
| Tuber melanosporum (Tuber melanosporum Mel28) | 7496 | 6550 | 946 | 25 | 6525 | 91 | 0 | 0 | 0 |
Pleistophoridae
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Vavraia culicis subsp. floridensis (Vavraia culicis subsp. floridensis) | 2773 | 2321 | 452 | 145 | 2176 | 184 | 0 | 0 | 0 | ||
| Trachipleistophora hominis (Trachipleistophora hominis) | 3212 | 2406 | 806 | 202 | 2204 | 266 | 0 | 0 | 0 |
Pleosporales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Paraphaeosphaeria sporulosa str. AP3s5-JAC2a (Paraphaeosphaeria sporulosa) | 14734 | 12112 | 2622 | 49 | 12063 | 161 | 0 | 0 | 0 | ||
| Corynespora cassiicola Philippines (Corynespora cassiicola Philippines) | 17158 | 13581 | 3577 | 254 | 13327 | 514 | 0 | 0 | 0 | ||
| Periconia macrospinosa str. DSE2036 (Periconia macrospinosa) | 18735 | 15492 | 3243 | 613 | 14879 | 1339 | 0 | 0 | 0 | ||
| Leptosphaeria maculans (Plenodomus lingam JN3) | 12469 | 8976 | 3493 | 22 | 8954 | 39 | 0 | 0 | 0 | ||
| Alternaria alternata str. SRC1lrK2f (Alternaria alternata) | 13466 | 12076 | 1390 | 37 | 12039 | 112 | 0 | 0 | 0 | ||
| Stagonospora sp. SRC1lsM3a (Stagonospora sp. SRC1lsM3a) | 14425 | 12818 | 1607 | 67 | 12751 | 189 | 0 | 0 | 0 | ||
| Bipolaris oryzae ATCC 44560 (Bipolaris oryzae ATCC 44560) | 12002 | 11120 | 882 | 6 | 11114 | 30 | 0 | 0 | 0 | ||
| Stemphylium lycopersici str. CIDEFI 216 (Stemphylium lycopersici) | 8997 | 8685 | 312 | 4 | 8681 | 32 | 0 | 0 | 0 | ||
| Bipolaris maydis C5 (Bipolaris maydis C5) | 13311 | 12312 | 999 | 147 | 12165 | 648 | 0 | 0 | 0 | ||
| Pyrenophora tritici-repentis Pt-1C-BFP (Pyrenophora tritici-repentis Pt-1C-BFP) | 12169 | 10975 | 1194 | 50 | 10925 | 343 | 0 | 0 | 0 | ||
| Phaeosphaeria nodorum (Parastagonospora nodorum SN15) | 12391 | 10376 | 2015 | 27 | 10349 | 56 | 0 | 0 | 0 | ||
| Pyrenochaeta sp. DS3sAY3a (Pyrenochaeta sp. DS3sAY3a) | 14990 | 13000 | 1990 | 111 | 12889 | 246 | 0 | 0 | 0 | ||
| Clohesyomyces aquaticus str. CBS 115471 (Clohesyomyces aquaticus) | 15811 | 12518 | 3293 | 138 | 12380 | 276 | 0 | 0 | 0 | ||
| Pyrenophora teres (Pyrenophora teres f. teres 0-1) | 11799 | 11194 | 605 | 227 | 10967 | 500 | 0 | 0 | 0 | ||
| Ascochyta rabiei str. ArDII (Ascochyta rabiei) | 10596 | 9733 | 863 | 22 | 9711 | 87 | 0 | 0 | 0 | ||
| Exserohilum turcica Et28A (Exserohilum turcica Et28A) | 11698 | 10716 | 982 | 71 | 10645 | 247 | 0 | 0 | 0 | ||
| Epicoccum nigrum str. ICMP 19927 (Epicoccum nigrum) | 12025 | 10697 | 1328 | 52 | 10645 | 104 | 0 | 0 | 0 |
Polyporales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Phlebiopsis gigantea 11061_1 CR5-6 (Phlebiopsis gigantea 11061_1 CR5-6) | 11855 | 9984 | 1871 | 301 | 9683 | 935 | 0 | 0 | 0 | ||
| Trametes coccinea BRFM310 (Trametes coccinea BRFM310) | 12692 | 10803 | 1889 | 299 | 10504 | 926 | 0 | 0 | 0 | ||
| Dichomitus squalens LYAD-421 SS1 (Dichomitus squalens LYAD-421 SS1) | 7192 | 6303 | 889 | 352 | 5951 | 1135 | 0 | 0 | 0 | ||
| Gelatoporia subvermispora B (Gelatoporia subvermispora B) | 12122 | 10397 | 1725 | 1047 | 9350 | 2372 | 0 | 0 | 0 | ||
| Fibroporia radiculosa str. TFFH 294 (Fibroporia radiculosa) | 9262 | 8490 | 772 | 419 | 8071 | 1001 | 0 | 0 | 0 | ||
| Grifola frondosa str. 9006-11 (Grifola frondosa) | 15039 | 11137 | 3902 | 1149 | 9988 | 2102 | 0 | 0 | 0 | ||
| Trametes cinnabarina str. BRFM137 (Trametes cinnabarina) | 10233 | 9805 | 428 | 165 | 9640 | 979 | 0 | 0 | 0 | ||
| Laetiporus sulphureus 93-53 (Laetiporus sulphureus 93-53) | 13740 | 11574 | 2166 | 1461 | 10113 | 2381 | 0 | 0 | 0 | ||
| Daedalea quercina L-15889 (Daedalea quercina L-15889) | 12191 | 10275 | 1916 | 310 | 9965 | 908 | 0 | 0 | 0 | ||
| Postia placenta Mad-698-R (Postia placenta Mad-698-R) | 9083 | 8364 | 719 | 2077 | 6287 | 3864 | 0 | 0 | 0 | ||
| Wolfiporia cocos MD-104 SS10 (Wolfiporia cocos MD-104 SS10) | 12212 | 10500 | 1712 | 1058 | 9442 | 2093 | 0 | 0 | 0 | ||
| Phanerochaete chrysosporium (Phanerochaete chrysosporium RP-78) | 13594 | 11135 | 2459 | 729 | 10406 | 1584 | 0 | 0 | 0 | ||
| Fomitopsis pinicola FP-58527 SS1 (Fomitopsis schrenkii) | 13851 | 12512 | 1339 | 925 | 11587 | 2269 | 0 | 0 | 0 | ||
| Ganoderma sinense ZZ0214-1 (Ganoderma sinense ZZ0214-1) | 15478 | 13599 | 1879 | 1166 | 12433 | 3593 | 0 | 0 | 0 | ||
| Phlebia centrifuga str. FBCC195 (Hermanssonia centrifuga) | 13684 | 10529 | 3155 | 1000 | 9529 | 1985 | 0 | 0 | 0 |
Pucciniales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Puccinia graminis (Puccinia graminis f. sp. tritici CRL 75-36-700-3) | 15800 | 14543 | 1257 | 158 | 14385 | 1464 | 0 | 0 | 0 | ||
| Puccinia striiformis f. sp. tritici PST-130 str. Race 130 (Puccinia striiformis f. sp. tritici PST-130) | 18019 | 14206 | 3813 | 1778 | 12428 | 4075 | 0 | 0 | 0 | ||
| Puccinia graminis Ug99 (Puccinia graminis f. sp. tritici 04KEN156/4) | 22154 | 18945 | 3209 | 1033 | 17912 | 3969 | 0 | 0 | 0 | ||
| Melampsora larici-populina (Melampsora larici-populina 98AG31) | 16372 | 13530 | 2842 | 6161 | 7369 | 6623 | 0 | 0 | 0 | ||
| Puccinia triticina - GCA_000151525.2 (Puccinia triticina 1-1 BBBD Race 1) | 14878 | 13281 | 1597 | 1573 | 11708 | 4043 | 0 | 0 | 0 | ||
| Puccinia coronata var. avenae f. sp. avenae (Puccinia coronata f. sp. avenae) | 28270 | 26221 | 2049 | 8715 | 17506 | 15675 | 0 | 0 | 0 | ||
| Puccinia sorghi str. RO10H11247 (Puccinia sorghi) | 21078 | 16733 | 4345 | 6070 | 10663 | 7621 | 0 | 0 | 0 |
Rhizophydiales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Batrachochytrium dendrobatidis JEL423 (Batrachochytrium dendrobatidis JEL423) | 142 | 115 | 27 | 59 | 56 | 57 | 0 | 0 | 0 |
Russulales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Stereum hirsutum FP-91666 SS1 (Stereum hirsutum FP-91666 SS1) | 1612 | 1222 | 390 | 156 | 1066 | 255 | 0 | 0 | 0 | ||
| Heterobasidion irregulare TC 32-1 (Heterobasidion irregulare TC 32-1) | 13264 | 10752 | 2512 | 1606 | 9146 | 2559 | 0 | 0 | 0 | ||
| Peniophora sp. CONT (Peniophora sp. CONT) | 18940 | 15314 | 3626 | 4140 | 11174 | 5967 | 0 | 0 | 0 |
Saccharomycetales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Lachancea dasiensis CBS 10888 (Lachancea dasiensis) | 5096 | 5005 | 91 | 5 | 5000 | 48 | 0 | 0 | 0 | ||
| Candida glabrata (Nakaseomyces glabratus CBS 138) | 5311 | 4992 | 319 | 98 | 4894 | 192 | 0 | 0 | 0 | ||
| Zygosaccharomyces parabailii str. ATCC 60483 (Zygosaccharomyces parabailii) | 10086 | 10028 | 58 | 148 | 9880 | 4955 | 0 | 0 | 0 | ||
| Wickerhamomyces ciferrii str. NRRL Y-1031 (Wickerhamomyces ciferrii) | 6702 | 6364 | 338 | 446 | 5918 | 669 | 0 | 0 | 0 | ||
| Clavispora lusitaniae ATCC 42720 (Clavispora lusitaniae ATCC 42720) | 5936 | 5279 | 657 | 54 | 5225 | 121 | 0 | 0 | 0 | ||
| Ogataea parapolymorpha DL-1 (Ogataea parapolymorpha DL-1) | 5325 | 5227 | 98 | 0 | 5227 | 12 | 0 | 0 | 0 | ||
| Lipomyces starkeyi NRRL Y-11557 (Lipomyces starkeyi NRRL Y-11557) | 8182 | 6723 | 1459 | 726 | 5997 | 1187 | 0 | 0 | 0 | ||
| Suhomyces tanzawaensis NRRL Y-17324 (Suhomyces tanzawaensis NRRL Y-17324) | 5884 | 5305 | 579 | 48 | 5257 | 118 | 0 | 0 | 0 | ||
| Candida duobushaemulonis ([Candida] duobushaemuli strain strain B09383) | 666 | 653 | 13 | 0 | 653 | 3 | 0 | 0 | 0 | ||
| Lachancea lanzarotensis str. CBS 12615 (Lachancea lanzarotensis) | 5058 | 4990 | 68 | 5 | 4985 | 55 | 0 | 0 | 0 | ||
| Wickerhamiella sorbophila str. DS02 (Wickerhamiella sorbophila) | 4741 | 4045 | 696 | 66 | 3979 | 173 | 0 | 0 | 0 | ||
| Cyberlindnera jadinii str. CBS1600 (Cyberlindnera jadinii) | 5057 | 4590 | 467 | 85 | 4505 | 210 | 0 | 0 | 0 | ||
| Kazachstania naganishii CBS 8797 (Huiozyma naganishii CBS 8797) | 5321 | 5066 | 255 | 49 | 5017 | 195 | 0 | 0 | 0 | ||
| [Candida] pseudohaemulonii ([Candida] pseudohaemuli strain B12108) | 5134 | 4914 | 220 | 96 | 4818 | 167 | 0 | 0 | 0 | ||
| Kazachstania africana CBS 2517 (Kazachstania africana CBS 2517) | 5378 | 5187 | 191 | 51 | 5136 | 214 | 0 | 0 | 0 | ||
| Babjeviella inositovora NRRL Y-12698 (Babjeviella inositovora NRRL Y-12698) | 6398 | 5189 | 1209 | 105 | 5084 | 377 | 0 | 0 | 0 | ||
| Eremothecium gossypii FDAG1 (Eremothecium gossypii FDAG1) | 4774 | 4772 | 2 | 0 | 4772 | 5 | 0 | 0 | 0 | ||
| Spathaspora passalidarum NRRL Y-27907 (Spathaspora passalidarum NRRL Y-27907) | 5983 | 5594 | 389 | 107 | 5487 | 307 | 0 | 0 | 0 | ||
| Millerozyma farinosa CBS 7064 (Millerozyma farinosa CBS 7064) | 11175 | 10987 | 188 | 547 | 10440 | 5486 | 0 | 0 | 0 | ||
| Pichia membranifaciens NRRL Y-2026 (Pichia membranifaciens NRRL Y-2026) | 5542 | 4983 | 559 | 34 | 4949 | 103 | 0 | 0 | 0 | ||
| Candida auris ([Candida] auris strain strain B8441) | 896 | 874 | 22 | 2 | 872 | 11 | 0 | 0 | 0 | ||
| Torulaspora delbrueckii str. CBS 1146 (Torulaspora delbrueckii) | 4972 | 4889 | 83 | 8 | 4881 | 63 | 0 | 0 | 0 | ||
| Kuraishia capsulata CBS 1993 (Kuraishia capsulata CBS 1993) | 6029 | 5377 | 652 | 44 | 5333 | 235 | 0 | 0 | 0 | ||
| Eremothecium cymbalariae DBVPG#7215 (Eremothecium cymbalariae DBVPG#7215) | 4434 | 4323 | 111 | 0 | 4323 | 10 | 0 | 0 | 0 | ||
| Ascoidea rubescens DSM 1968 (Ascoidea rubescens DSM 1968) | 6785 | 5032 | 1753 | 256 | 4776 | 552 | 0 | 0 | 0 | ||
| Scheffersomyces stipitis CBS 6054 (Scheffersomyces stipitis CBS 6054) | 5818 | 5646 | 172 | 80 | 5566 | 238 | 0 | 0 | 0 | ||
| Yarrowia lipolytica (Yarrowia lipolytica CLIB122) | 6447 | 5476 | 971 | 265 | 5211 | 685 | 0 | 0 | 0 | ||
| Lodderomyces elongisporus NRRL YB-4239 (Lodderomyces elongisporus NRRL YB-4239) | 5799 | 5395 | 404 | 117 | 5278 | 247 | 0 | 0 | 0 | ||
| Candida parapsilosis (Candida parapsilosis CDC317) | 5863 | 5638 | 225 | 42 | 5596 | 320 | 0 | 0 | 0 | ||
| Cyberlindnera fabianii str. YJS4271 (Cyberlindnera fabianii) | 5674 | 5386 | 288 | 25 | 5361 | 152 | 0 | 0 | 0 | ||
| Ogataea polymorpha str. NCYC 495 leu1.1 (Ogataea polymorpha) | 5171 | 5041 | 130 | 0 | 5041 | 49 | 0 | 0 | 0 | ||
| Komagataella pastoris (Komagataella phaffii GS115) | 5040 | 4978 | 62 | 0 | 4978 | 7 | 0 | 0 | 0 | ||
| Brettanomyces bruxellensis AWRI1499 (Brettanomyces bruxellensis AWRI1499) | 4861 | 3768 | 1093 | 23 | 3745 | 116 | 0 | 0 | 0 | ||
| Sugiyamaella lignohabitans str. CBS 10342 (Sugiyamaella lignohabitans) | 5135 | 4776 | 359 | 54 | 4722 | 232 | 0 | 0 | 0 | ||
| Nadsonia fulvescens var. elongata DSM 6958 (Nadsonia fulvescens var. elongata DSM 6958) | 5648 | 4846 | 802 | 37 | 4809 | 322 | 0 | 0 | 0 | ||
| Ashbya gossypii (Eremothecium gossypii ATCC 10895) | 4775 | 4774 | 1 | 0 | 4774 | 12 | 0 | 0 | 0 | ||
| Zygosaccharomyces rouxii str. CBS 732 (Zygosaccharomyces rouxii) | 4991 | 4927 | 64 | 2 | 4925 | 95 | 0 | 0 | 0 | ||
| Vanderwaltozyma polyspora DSM 70294 (Vanderwaltozyma polyspora DSM 70294) | 5328 | 5133 | 195 | 95 | 5038 | 272 | 0 | 0 | 0 | ||
| Pichia kudriavzevii str. SD108 (Pichia kudriavzevii) | 7107 | 6039 | 1068 | 667 | 5372 | 1096 | 0 | 0 | 0 | ||
| Tetrapisispora blattae CBS 6284 (Henningerozyma blattae CBS 6284) | 5389 | 5035 | 354 | 45 | 4990 | 349 | 0 | 0 | 0 | ||
| Meyerozyma guilliermondii ATCC 6260 (Meyerozyma guilliermondii ATCC 6260) | 5920 | 5590 | 330 | 57 | 5533 | 205 | 0 | 0 | 0 | ||
| Pachysolen tannophilus NRRL Y-2460 (Pachysolen tannophilus NRRL Y-2460) | 5664 | 5067 | 597 | 49 | 5018 | 185 | 0 | 0 | 0 | ||
| Komagataella phaffii GS115 (Komagataella phaffii GS115 ASM174695v1) | 5035 | 4923 | 112 | 5 | 4918 | 15 | 0 | 0 | 0 | ||
| [Candida] haemuloni ([Candida] haemuli strain B11899) | 733 | 716 | 17 | 2 | 714 | 8 | 0 | 0 | 0 | ||
| Tortispora caseinolytica NRRL Y-17796 (Tortispora caseinolytica NRRL Y-17796) | 4656 | 3882 | 774 | 76 | 3806 | 131 | 0 | 0 | 0 | ||
| Hyphopichia burtonii NRRL Y-1933 (Hyphopichia burtonii NRRL Y-1933) | 5995 | 5506 | 489 | 46 | 5460 | 147 | 0 | 0 | 0 | ||
| Tetrapisispora phaffii CBS 4417 (Tetrapisispora phaffii CBS 4417) | 5253 | 5057 | 196 | 36 | 5021 | 145 | 0 | 0 | 0 | ||
| Debaryomyces hansenii CBS767 (Debaryomyces hansenii CBS767) | 6272 | 5872 | 400 | 134 | 5738 | 261 | 0 | 0 | 0 | ||
| Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993 (Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993) | 5837 | 5094 | 743 | 131 | 4963 | 202 | 0 | 0 | 0 | ||
| Naumovozyma dairenensis CBS 421 (Naumovozyma dairenensis CBS 421) | 5548 | 5394 | 154 | 52 | 5342 | 202 | 0 | 0 | 0 | ||
| Hanseniaspora guilliermondii (Hanseniaspora guilliermondii) | 4070 | 3024 | 1046 | 32 | 2992 | 128 | 0 | 0 | 0 | ||
| Candida tropicalis (Candida tropicalis MYA-3404) | 6254 | 5931 | 323 | 139 | 5792 | 393 | 0 | 0 | 0 | ||
| Wickerhamomyces anomalus NRRL Y-366-8 (Wickerhamomyces anomalus NRRL Y-366-8) | 6421 | 6046 | 375 | 120 | 5926 | 338 | 0 | 0 | 0 | ||
| Candida albicans (Candida albicans SC5314) | 6180 | 5811 | 369 | 40 | 5771 | 206 | 0 | 0 | 0 | ||
| Naumovozyma castellii CBS 4309 (Naumovozyma castellii) | 5592 | 5433 | 159 | 91 | 5342 | 222 | 0 | 0 | 0 | ||
| Saccharomyces cerevisiae (Saccharomyces cerevisiae S288C) | 6600 | 5564 | 1036 | 121 | 5443 | 356 | 0 | 0 | 0 |
Schizosaccharomycetales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Schizosaccharomyces japonicus (Schizosaccharomyces japonicus yFS275) | 4878 | 4520 | 358 | 57 | 4463 | 194 | 0 | 0 | 0 | ||
| Schizosaccharomyces pombe (Schizosaccharomyces pombe 972h-) | 5145 | 4912 | 233 | 70 | 4842 | 192 | 0 | 0 | 0 | ||
| Schizosaccharomyces octosporus (Schizosaccharomyces octosporus yFS286) | 4986 | 4904 | 82 | 48 | 4856 | 131 | 0 | 0 | 0 | ||
| Schizosaccharomyces cryophilus (Schizosaccharomyces cryophilus OY26) | 5155 | 4984 | 171 | 52 | 4932 | 192 | 0 | 0 | 0 |
Sclerotiniaceae
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Sclerotinia sclerotiorum (Sclerotinia sclerotiorum 1980 UF-70) | 10175 | 7101 | 3074 | 109 | 6992 | 334 | 0 | 0 | 0 | ||
| Botrytis cinerea B05.10 (Botrytis cinerea B05.10) | 11707 | 10515 | 1192 | 72 | 10443 | 122 | 0 | 0 | 0 |
Sebacinales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Serendipita vermifera MAFF 305830 (Serendipita vermifera MAFF 305830) | 15234 | 12925 | 2309 | 2152 | 10773 | 4584 | 0 | 0 | 0 | ||
| Serendipita indica DSM 11827 (Serendipita indica DSM 11827) | 11766 | 10071 | 1695 | 1258 | 8813 | 2163 | 0 | 0 | 0 |
Sordariales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Sordaria macrospora k-hell (Sordaria macrospora k-hell) | 9898 | 9049 | 849 | 59 | 8990 | 199 | 0 | 0 | 0 | ||
| Neurospora crassa (Neurospora crassa OR74A) | 9758 | 8640 | 1118 | 37 | 8603 | 82 | 0 | 0 | 0 | ||
| Chaetomium globosum CBS 148.51 (Chaetomium globosum CBS 148.51) | 11048 | 9495 | 1553 | 143 | 9352 | 637 | 0 | 0 | 0 | ||
| Madurella mycetomatis str. mm55 (Madurella mycetomatis) | 10707 | 10158 | 549 | 149 | 10009 | 1327 | 0 | 0 | 0 |
Sordariomycetidae
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Phaeoacremonium minimum UCRPA7 (Phaeoacremonium minimum UCRPA7) | 8834 | 8449 | 385 | 42 | 8407 | 81 | 0 | 0 | 0 | ||
| Coniochaeta ligniaria NRRL 30616 (Coniochaeta ligniaria NRRL 30616) | 13658 | 10929 | 2729 | 318 | 10611 | 382 | 0 | 0 | 0 | ||
| Valsa mali var. pyri str. SXYL134 (Valsa mali var. pyri (nom. inval.)) | 10741 | 9551 | 1190 | 23 | 9528 | 69 | 0 | 0 | 0 | ||
| Coniella lustricola str. B22-T-1 (Coniella lustricola) | 11314 | 8648 | 2666 | 8 | 8640 | 55 | 0 | 0 | 0 | ||
| Diaporthe ampelina (Diaporthe ampelina) | 10704 | 9992 | 712 | 27 | 9965 | 87 | 0 | 0 | 0 |
Sporidiobolales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Rhodotorula toruloides ATCC 204091 (Rhodotorula toruloides ATCC 204091) | 2817 | 2546 | 271 | 105 | 2441 | 126 | 0 | 0 | 0 | ||
| Rhodotorula graminis WP1 (Rhodotorula graminis WP1) | 7275 | 6466 | 809 | 146 | 6320 | 392 | 0 | 0 | 0 |
Taphrinomycotina
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Pneumocystis murina B123 (Pneumocystis murina B123) | 3623 | 3552 | 71 | 5 | 3547 | 51 | 0 | 0 | 0 | ||
| Pneumocystis jirovecii RU7 (Pneumocystis jirovecii RU7) | 3761 | 3570 | 191 | 157 | 3413 | 169 | 0 | 0 | 0 | ||
| Neolecta irregularis DAH-3 (Neolecta irregularis DAH-3) | 5531 | 4241 | 1290 | 199 | 4042 | 298 | 0 | 0 | 0 | ||
| Pneumocystis carinii B80 (Pneumocystis carinii B80) | 3646 | 3568 | 78 | 55 | 3513 | 89 | 0 | 0 | 0 | ||
| Protomyces lactucaedebilis str. 12-1054 (Protomyces lactucae-debilis) | 6725 | 5290 | 1435 | 568 | 4722 | 546 | 0 | 0 | 0 |
Tremellales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Kockovaella imperatae str. NRRL Y-17943 (Kockovaella imperatae) | 7392 | 6395 | 997 | 71 | 6324 | 168 | 0 | 0 | 0 | ||
| Naematelia encephala str. 68-887.2 (Naematelia encephala) | 7964 | 6874 | 1090 | 72 | 6802 | 159 | 0 | 0 | 0 | ||
| Cryptococcus neoformans var. neoformans JEC21 (Cryptococcus neoformans var. neoformans JEC21) | 6632 | 6302 | 330 | 75 | 6227 | 241 | 0 | 0 | 0 | ||
| Tremella mesenterica DSM 1558 (Tremella mesenterica DSM 1558) | 1456 | 1012 | 444 | 210 | 802 | 187 | 0 | 0 | 0 | ||
| Kwoniella bestiolae CBS 10118 (Kwoniella bestiolae CBS 10118) | 9133 | 7652 | 1481 | 383 | 7269 | 520 | 0 | 0 | 0 |
Tubulinosematidae
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Anncaliia algerae PRA339 (Anncaliia algerae PRA339) | 3598 | 2339 | 1259 | 839 | 1500 | 825 | 0 | 0 | 0 |
Ustilaginales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Moesziomyces aphidis DSM 70725 (Moesziomyces aphidis) | 6011 | 5626 | 385 | 21 | 5605 | 36 | 0 | 0 | 0 | ||
| Kalmanozyma brasiliensis GHG001 (Kalmanozyma brasiliensis GHG001) | 5765 | 5620 | 145 | 0 | 5620 | 8 | 0 | 0 | 0 | ||
| Sporisorium reilianum (Sporisorium reilianum SRZ2) | 6673 | 6503 | 170 | 30 | 6473 | 65 | 0 | 0 | 0 | ||
| Ustilago maydis (Ustilago maydis 521) | 6765 | 6460 | 305 | 22 | 6438 | 83 | 0 | 0 | 0 | ||
| Testicularia cyperi str. MCA 3645 (Testicularia cyperi) | 7069 | 5711 | 1358 | 85 | 5626 | 154 | 0 | 0 | 0 | ||
| Ustilago hordei str. Uh4857-4 (Ustilago hordei) | 7109 | 6693 | 416 | 307 | 6386 | 488 | 0 | 0 | 0 | ||
| Anthracocystis flocculosa PF-1 (Pseudozyma flocculosa PF-1) | 4425 | 4039 | 386 | 94 | 3945 | 124 | 0 | 0 | 0 | ||
| Pseudozyma hubeiensis SY62 (Pseudozyma hubeiensis SY62) | 7472 | 6160 | 1312 | 11 | 6149 | 19 | 0 | 0 | 0 |
Verrucariales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endocarpon pusillum Z07020 (Endocarpon pusillum Z07020) | 9238 | 8036 | 1202 | 206 | 7830 | 342 | 0 | 0 | 0 |
Wallemiales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Wallemia ichthyophaga EXF-994 (Wallemia ichthyophaga EXF-994) | 4865 | 4017 | 848 | 105 | 3912 | 230 | 0 | 0 | 0 |
Xylariales
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Pestalotiopsis fici W106-1 (Pestalotiopsis fici W106-1) | 15413 | 14168 | 1245 | 146 | 14022 | 515 | 0 | 0 | 0 | ||
| Hypoxylon sp. CI-4A (Hypoxylon sp. CI-4A) | 11701 | 10504 | 1197 | 43 | 10461 | 106 | 0 | 0 | 0 | ||
| Eutypa lata UCREL1 (Eutypa lata UCREL1) | 11685 | 10747 | 938 | 91 | 10656 | 226 | 0 | 0 | 0 | ||
| Pseudomassariella vexata str. CBS 129021 (Pseudomassariella vexata) | 12565 | 10438 | 2127 | 109 | 10329 | 232 | 0 | 0 | 0 | ||
| Rosellinia necatrix str. W97 (Rosellinia necatrix) | 12444 | 10619 | 1825 | 44 | 10575 | 179 | 0 | 0 | 0 | ||
| Daldinia sp. EC12 (Daldinia sp. EC12) | 11161 | 10194 | 967 | 36 | 10158 | 85 | 0 | 0 | 0 |
Fungi
| Species | # Genes | # Genes in a tree | # Orphaned genes | # Genes in a single-species tree | # Genes in a multi-species tree | Coverage | # species-specific duplications | # Split genes | # short genes | # Long genes | Gene QC |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Conidiobolus coronatus NRRL 28638 (Conidiobolus coronatus NRRL 28638) | 10568 | 8257 | 2311 | 2675 | 5582 | 3599 | 0 | 0 | 0 | ||
| Jaminaea rosea str. MCA 5214 (Jaminaea rosea) | 6858 | 5755 | 1103 | 237 | 5518 | 208 | 0 | 0 | 0 | ||
| Meira miltonrushii str. MCA 3882 (Meira miltonrushii) | 7452 | 6497 | 955 | 440 | 6057 | 554 | 0 | 0 | 0 | ||
| Acaromyces ingoldii str. MCA 4198 (Acaromyces ingoldii) | 8026 | 7009 | 1017 | 282 | 6727 | 374 | 0 | 0 | 0 | ||
| Leucosporidium creatinivorum str. 62-1032 (Leucosporidium creatinivorum) | 9854 | 8405 | 1449 | 788 | 7617 | 1280 | 0 | 0 | 0 | ||
| Xylona heveae TC161 (Xylona heveae TC161) | 8201 | 7031 | 1170 | 61 | 6970 | 76 | 0 | 0 | 0 | ||
| Plicaturopsis crispa FD-325 SS-3 (Plicaturopsis crispa FD-325 SS-3) | 2716 | 2100 | 616 | 287 | 1813 | 510 | 0 | 0 | 0 | ||
| Sistotremastrum niveocremeum HHB9708 (Sistotremastrum niveocremeum HHB9708) | 13069 | 12110 | 959 | 227 | 11883 | 518 | 0 | 0 | 0 | ||
| Exidia glandulosa HHB12029 (Exidia glandulosa HHB12029) | 26682 | 21979 | 4703 | 7704 | 14275 | 11041 | 0 | 0 | 0 | ||
| Tilletiopsis washingtonensis str. MCA 4186 (Tilletiopsis washingtonensis) | 7005 | 5609 | 1396 | 57 | 5552 | 55 | 0 | 0 | 0 | ||
| Pseudomicrostroma glucosiphilum str. MCA 4718 (Pseudomicrostroma glucosiphilum) | 6681 | 5699 | 982 | 145 | 5554 | 174 | 0 | 0 | 0 | ||
| Cutaneotrichosporon oleaginosum str. IBC0246 (Cutaneotrichosporon oleaginosum) | 8320 | 6462 | 1858 | 156 | 6306 | 483 | 0 | 0 | 0 | ||
| Ceraceosorus guamensis str. MCA 4658 (Ceraceosorus guamensis) | 7822 | 6073 | 1749 | 197 | 5876 | 170 | 0 | 0 | 0 | ||
| Sistotremastrum suecicum HHB10207 ss-3 (Sistotremastrum suecicum HHB10207 ss-3) | 13651 | 12304 | 1347 | 228 | 12076 | 540 | 0 | 0 | 0 |
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