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Epicoccum nigrum str. ICMP 19927 (ASM211631v1) ▼

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About Epicoccum nigrum str. ICMP 19927 (GCA_002116315)

Epicoccum nigrum is a species of fungus, in the phylum Ascomycota. A plant pathogen and endophyte, it is a widespread fungus which produces coloured pigments that can be used as antifungal agents against other pathogenic fungi. The fluorescent stain, epicocconone is extracted from it.

(Text and image from Wikipedia, the free encyclopaedia.)

Taxonomy ID 105696

Data source The University of Auckland

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Example region

Genome assembly: ASM211631v1

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Example geneExample transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

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Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

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Example gene tree

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

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Phylogenetic overview of gene families

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Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor