Fusarium oxysporum vs Fusarium verticillioides Synteny results
The syntenic regions between Fusarium oxysporum (Fusarium oxysporum f. sp. lycopersici, FO2) and Fusarium verticillioides (Fusarium verticillioides 7600, ASM14955v1) were extracted from their pairwise alignment in Ensembl Fungi release 94. We look for stretches where the alignment blocks are in synteny. The search is run in two phases. In the first one, syntenic alignments that are closer than 200 kbp are grouped. In the second phase, the groups that are in synteny are linked provided that no more than 2 non-syntenic groups are found between them and they are less than 3Mbp apart.
No configuration parameters are available.
Statistics over 2 synteny blocks
|Genome coverage (bp)||Coding exon coverage (bp)|
Uncovered: 42,984,972 out of 61,470,697
Uncovered: 13,860,532 out of 21,631,774
Uncovered: 23,486,484 out of 41,885,085
Uncovered: 10,086,709 out of 17,852,160