EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Coprinopsis cinerea okayama7#130 (CC3)

About Coprinopsis cinerea okayama7#130 (GCA_000182895)

Coprinopsis cinerea is a species of mushroom in the family Psathyrellaceae. Commonly known as the gray shag, it is edible, but must be used promptly after collecting.

Coprinopsis cinerea is an important model organism for studying fungal sex and mating types, mushroom development, and the evolution of multicellularity of fungi. The genome sequence was published in 2010. It is considered to be particularly suited organism to study meiosis, due to its synchronous meiotic development and prolonged prophase.

(Text and image from Wikipedia, the free encyclopaedia.)

Taxonomy ID 240176

Data source Broad Institute

More information and statistics

Genome assembly: CC3

More information and statistics

Download DNA sequence (FASTA)

Display your data in Ensembl Fungi

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

Update your old Ensembl IDs

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor