Puccinia striiformis f. sp. tritici PST-78 (GCA_001191645) (P_striiformis_V1)

Puccinia striiformis f. sp. tritici PST-78 (GCA_001191645) Assembly and Gene Annotation

About Puccinia striiformis f. sp. tritici PST-78 (GCA_001191645)

Wikipedia

Puccinia striiformis var. striiformis is a plant pathogen. It causes stripe rust on wheat, but has other hosts as well. The species is common in Europe and in more recent years has become a problem in Australia. Infection can causes losses of up to 40%, and the fungus will infect both winter wheat and spring wheat. The taxonomy of Puccinia striiformis was revised in 2010. The commonly called stripe rusts on wheat and grasses were separated into four species based on molecular and morphological studies: Puccinia striiformis sensu stricto (on Aegilops, Elymus, Hordeum and Triticum), Puccinia pseudostriiformis (on Poa), Puccinia striiformoides (on Dactylis) and Puccinia gansensis (on Achnatherum)

The stripe rust, Puccinia striiformis, can greatly decrease wheat yield in northern Punjab and Khyber Pakhtunkhwa (NWFP).

(Text from Wikipedia, the free encyclopaedia.)

Assembly

The assembly presented is the P_striiformis_V1 assembly submitted to INSDC with the assembly accession GCA_001191645.1.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_001191645.1, with additional non-coding genes derived from Rfam. For more details, please visit INSDC annotation import.

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

AssemblyP_striiformis_V1, INSDC Assembly GCA_001191645.1,
Database version98.1
Base Pairs117,391,083
Golden Path Length117,391,083
Genebuild by07
Genebuild methodGenerated from ENA annotation
Data sourceEuropean Nucleotide Archive

Gene counts

Coding genes19,562
Non coding genes534
Small non coding genes534
Pseudogenes186
Gene transcripts21,222

About this species