Puccinia graminis f. sp. tritici (Pgt_Ug99)

Puccinia graminis f. sp. tritici Assembly and Gene Annotation

About Puccinia graminis f. sp. tritici (GCA_008520325.1)

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Stem rust, also known as cereal rust, black rust, red rust or red dust, is caused by the fungus Puccinia graminis, which causes significant disease in cereal crops. Crop species that are affected by the disease include bread wheat, durum wheat, barley and triticale. These diseases have affected cereal farming throughout history. The annual recurrence of stem rust of wheat in North Indian plains was discovered by Prof. K.C. Mehta. An outbreak of another virulent race of stem rust, TTTTF, took place in Sicily in 2016, suggesting that the disease is returning to Europe. Comprehensive genomic analysis of Puccinia graminis, combined with plant pathology and climate data, has pointed out the potential of the re-emergence of stem wheat rust in UK.

(Text from Wikipedia

Assembly

The assembly presented has been imported from INSDC and has the assembly accession GCA_008520325.1.

Annotation

The annotation presented is derived from annotation submitted to INSDC with the assembly accession [GCA_008520325.1] (http://www.ebi.ac.uk/ena/data/view/GCA_008520325.1), with additional non-coding genes from Rfam. For more details, please visit INSDC annotation import.

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

AssemblyPgt_Ug99, INSDC Assembly GCA_008520325.1,
Database version111.1
Golden Path Length176,235,062
Genebuild byUniversity of Minnesota
Genebuild methodImport
Data sourceUniversity of Minnesota

Gene counts

Coding genes36,652
Non coding genes790
Small non coding genes790
Gene transcripts38,610